Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7971 |
Symbol | |
ID | 8339349 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 9248091 |
End bp | 9249374 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644961056 |
Product | ornithine aminotransferase |
Protein accession | YP_003118635 |
Protein GI | 256397071 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
TIGRFAM ID | [TIGR01885] ornithine aminotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCACGC TCTCTGACAC CGGCCGGGAC ACCGAGCCGG GGACCTTCAA GGCCCAGGCC GGCGCCGGAC CGCAGAACCC GCCCTCGGCC CGCGCCGAGG CGCTGATCGA GCAGTCCGAC GCGCACACCG CGCACAACTA CCACCCGCTG CCGGTGGTGA TCGCCGAGGC CGACGGCGCC TGGGTGACCG ACGTCGACGG CAACCGCTAC CTGGACATGC TCGCCGGGTA CTCCGCGCTG AACTTCGGGC ACCGCAACCC GGTGCTGCTG GCCGCGGCGC GCGAGCAGCT GGGGCGGGTG ACGCTGACCT CGCGGGCGTT CCACCACGAC CAGTTCGGGC CGTTCGTCGC GGAGCTGGCA GAGCTGTGCG GCAAGCAGGC GGCGCTGCCG ATGAACTCCG GCGCCGAGGC GGTGGAGACC GCGCTGAAGA CCGCGCGCAA GTGGGGATAC CAGGTCAAGG GCGTGCCGGA AGACCGCGCG CAGATCATCA CCTGCGAGGG CAACTTCCAC GGCCGGACGC TGTCGATCGT GTCCTTCTCC ACCGACCCCG ACGCGCGCCA CGAGTTCGGC CCGTTCACGC CGGGGTTCGT CTCAGTGCCC TACGGCGACG CCGCGGCGAT CGAGGCCGCC ATCACCGACG ACACCGTGGC GATCCTGCTG GAGCCGATCC AAGGCGAGGC CGGGGTCCTG GTGCCGCCGG AGGGATACCT GGCGGCGGTG CGCGAGATCT GCACGCGGCG CGGCATCCTG ATGATGGCCG ACGAGATCCA GTCCGGGCTG GGACGGACCG GGTACACGTT CGCGTGCGAC TACGAGAACG TCGTGCCCGA CGTCTACATC CTGGGCAAGG CGCTCGGCGG CGGGATCCTG CCGGTGTCGG CGGTGGTCGC CGACCGCGAC GTGCTCGGCG TGTTCGCCCC CGGCGAGCAC GGCTCGACGT TCGGCGGGAA CCCGCTGGCG TGCGCGGTCG GACGCGCGGT GGTCGGGCTG CTGGCCACCG GCGAGTATCA GAGCCGCGCG CAGAAGCTCG GCACGCACCT GCACGAGGCG CTGGCGAAGC TGCCGCCGGA GATGGTGCGC GAAGTCCGCG GCCGCGGTCT GTGGGCCGGT GTGGACATCG ATCCCGGATT CGGCACCGGG CGCGAGATCT CGGAGAAGCT GATGGCGCGC GGAGTCCTCG CCAAGGACAC GCACGGCTCG ACGATCCGCA TGGCGCCGCC GCTCGTGGTG ACCGCGGAGG ACCTGGACTG GGCAGTGCTG CAACTACAGA GCGCTCTGGG TTGA
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Protein sequence | MTTLSDTGRD TEPGTFKAQA GAGPQNPPSA RAEALIEQSD AHTAHNYHPL PVVIAEADGA WVTDVDGNRY LDMLAGYSAL NFGHRNPVLL AAAREQLGRV TLTSRAFHHD QFGPFVAELA ELCGKQAALP MNSGAEAVET ALKTARKWGY QVKGVPEDRA QIITCEGNFH GRTLSIVSFS TDPDARHEFG PFTPGFVSVP YGDAAAIEAA ITDDTVAILL EPIQGEAGVL VPPEGYLAAV REICTRRGIL MMADEIQSGL GRTGYTFACD YENVVPDVYI LGKALGGGIL PVSAVVADRD VLGVFAPGEH GSTFGGNPLA CAVGRAVVGL LATGEYQSRA QKLGTHLHEA LAKLPPEMVR EVRGRGLWAG VDIDPGFGTG REISEKLMAR GVLAKDTHGS TIRMAPPLVV TAEDLDWAVL QLQSALG
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