| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7969 |
|---|
| Symbol | |
|---|
| ID | 8339347 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 9245399 |
|---|
| End bp | 9247066 |
|---|
| Gene Length | 1668 bp |
|---|
| Protein Length | 555 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644961054 |
|---|
| Product | protein of unknown function DUF21 |
|---|
| Protein accession | YP_003118633 |
|---|
| Protein GI | 256397069 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCCATCC TGGTCGTCCT GGCGCTGATC CTCGTCGAGG CACTGTTCGT CGCCTCGGAG
ATCGCGCTCG TTTCGTTGCG CGAGAGCCAG ATCGAGACCT TGGCCCAGCA GGGCCGCCGC
GGCCAGGTGG TGGCCAGACT GGTGCGCGAC CAGAACCGCT GGCTGGCCAC CGTCCAGATC
GGGGTCACGC TGACCGCGCT GCTGTCCTCG GCCTACGGCG CCATCACGCT GTCGGAGAGC
GCCAAGCGAG GGCTGATCAG CGCCGGGCTC GGCACCGGGC TGGCCGGCTT CCTCGGGGTC
GTCGGCGTCA CCCTGGTCAT CACCTTCGTG ACCCTGGTGA TCGGCGAGCT GGCGCCCAAG
CGGCTGGCGC TGCAGCGGCC GGAGCCCACG GCGCTCGCGG TCGCGCCGTT CCTGAACCGG
GTCGCCACGG TCATGCGGCC CTTCATCTTC CTGCTCTCGG TGTGCACCAA CGGCGTGGTG
CGGCTGTTCG GCGGCGACCC GAACGTGGGG CGCGAGGCGG TGTCCTCCGA CGAGCTGCGG
CTGATGGTGG CCGGCAACGA GACGCTGAAC AGCGACGAGC GCGAGCTGAT CGACGAGATC
TTCGACGCCG GCGACCGGCA GCTGCGCGAG GTGCTGGTAC CGCGGACCGA GGTCACGTTC
CTGGACGCCG ACCTGCCGAT CCGCCAGGCG GCGCGGATCG CCGCCTCCGA GCCGCACTCG
CGCTATCCGG TGATCGAGGG CTCGGCGGAC AACGTCATCG GGTTCGTGCA CGTCCGGGAC
TTCCTCAACC CGGAGCTGGC CGGCCGCTCG ATCCGGCTGG AGGAGATCGC CCGGCCGGTG
AAGATGCTGC CGACCTCCAA GCAGGTGCTC TCGGCGCTGT CGGAGATGCG CGCGGAATCC
ATGCACCTGG CGATCGTCGT CGACGAGTAC GGCGGGACCG CCGGCATCGT CACGCTGGAG
GACCTCATCG AGGAGCTGAT CGGCGACATC CAGGACGAGT ACGACGTCGG CCAGGCCGGC
ACCACCCGGC TGGTCGGCGG CGTGATGGAG GTCGACGGCC TGCTGAACCT CGACGACTTC
ATGGACGAGA CCGGGATCGA GCTGCCCGAC GGGCCGTATG AGACCGCGGC GGGCTTCATC
GTGGCCCAGC TCGGCCGGCT TCCCGAGCTC GGCGACGAGG TGGTGGTCGC TCTGGAGGCC
CCGCCGACGC GCGGCGGCTC CGACGACGGC CACGAGGACG CCGCCCCGGA GATCCACCGC
TACGAGCTGA AGGTGGCGGA GATGGACGGC CGCCGGATCG CGCGGATCCG CATCACACGG
CTGCCGGAGG GCGGCGCGGA CGGCACAGAT GGCTCAGACG GCTCTGATAG TTCCGACACT
TCCGAGGGCG CCGACAGCTC CGAGATCGCC GAGCCCTCCG AGATCTCCGA CGGCTCCGAC
GGTTCCGCTG CGGACAGTCC GGTTCCCGAT GATTCCGGCG CTGACGGTTC CGATGCTGAC
AGTTCTGCTG CCGAAGGTTC GGTGAACGGC TCAGTCATCC CCGCCGAACC GTCCCCGGAC
ATCACCTCCG GTGATCATTC GGACACTGAT GGTGCCGACC CGGCCGACCA GGTCGGTGCG
GGTGAGGAGA TCCCGGGAGA ACCCGATCAA AGCGAGCCGC GGATCTGA
|
|---|
| Protein sequence | MSILVVLALI LVEALFVASE IALVSLRESQ IETLAQQGRR GQVVARLVRD QNRWLATVQI
GVTLTALLSS AYGAITLSES AKRGLISAGL GTGLAGFLGV VGVTLVITFV TLVIGELAPK
RLALQRPEPT ALAVAPFLNR VATVMRPFIF LLSVCTNGVV RLFGGDPNVG REAVSSDELR
LMVAGNETLN SDERELIDEI FDAGDRQLRE VLVPRTEVTF LDADLPIRQA ARIAASEPHS
RYPVIEGSAD NVIGFVHVRD FLNPELAGRS IRLEEIARPV KMLPTSKQVL SALSEMRAES
MHLAIVVDEY GGTAGIVTLE DLIEELIGDI QDEYDVGQAG TTRLVGGVME VDGLLNLDDF
MDETGIELPD GPYETAAGFI VAQLGRLPEL GDEVVVALEA PPTRGGSDDG HEDAAPEIHR
YELKVAEMDG RRIARIRITR LPEGGADGTD GSDGSDSSDT SEGADSSEIA EPSEISDGSD
GSAADSPVPD DSGADGSDAD SSAAEGSVNG SVIPAEPSPD ITSGDHSDTD GADPADQVGA
GEEIPGEPDQ SEPRI
|
|---|
| |