| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7958 |
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| Symbol | |
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| ID | 8339336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 9234185 |
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| End bp | 9235243 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644961043 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003118622 |
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| Protein GI | 256397058 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.997663 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTGATG CTGGTCAGGT CGCCGAGCTG GACGGCGCGC GGGGCGCCCT TGTAGGCGTC
CGCATAGATG GCGGTGCTGA TTTCGGTGGC GATGTCGGCG ATGTCAAGGA GGGCGTCGGT
GAGCGTGTGG GCGACGGTGC AGACGGCCTG GAGGAGGCTG TGGCGGTCTT CACCCGGGTG
CGTCCGCGGC TGTTCGGAAT CGCCTACCGC ATCCTGAGCA GCGTTACCGA GGCTGAGGAC
CTGGTTCAGG AGGTCTGGGT GCGGTGGCAG ACGTGCGACC GCAAGGCGGT GCGTGATCCG
GCGGCGTTCC TGGCGACGAC TGCGATCCGG CTGGCCATCA ACGAGCTCCG GTCGGCGCGT
GTTCGGCGGG AGAAGTACGT TGGGCCGTGG CTGCCCGAGC CTGTCGAGAC CAGTGCCGAT
CCTTATCTCG GCGCCGAGCG TGGTGAGGCC TTGCAGTTCG CGGCTCTGCT GCTGATGGAG
AAGCTCACTC CTAATGAACG CGCGGCGTAT GTGCTGCGGG AAGCGTTCGA TTATTCGTAT
CCGGAGATCG CCGACGTTCT GGGCACGACC GGCGCGGCGG TACGGCAGTC GGTCAGCAGA
GCCCGTAAAC ACATGGCGCG CGAACGCCGC GTTTCCGCTC CTGCCGCCGC CCAAAGGGAG
CTGCTGACCA AGTTCATTGC AGCGGCTCGT GACGGCGACA TGGCAGCGCT GGAGCAGCTC
TTCGCCGCAG ACGTCGCCAG CGTGTCCGAC GGCAACGGCC GCGCCCGCGT CGGCCGCCGC
CCGGTGGTCG GGGCATCGCG TGTGGCGAAG TTTCTTAAGG CGATGTCGAG CTGGTTCTGG
GACGGCGTCG AGGTGCTGTG GGTGACCACG AACGGACAGA CCTCTGCCCT GCTTCGGCAT
GACGGCGCTC TGTGGGGAAT GATCACGGTC AGCGTCTCCG GCGAGCACAT CGATCAGGTG
CTCTGGATGT TCAACCCGGA GAAGATCACC GCGAGGTCGC TGCCGCCGGG ACTGGTGCTC
GATGGCGGGT TCGCTGAGGT GACGAAGGCG AGCCCTTAA
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| Protein sequence | MSDAGQVAEL DGARGALVGV RIDGGADFGG DVGDVKEGVG ERVGDGADGL EEAVAVFTRV
RPRLFGIAYR ILSSVTEAED LVQEVWVRWQ TCDRKAVRDP AAFLATTAIR LAINELRSAR
VRREKYVGPW LPEPVETSAD PYLGAERGEA LQFAALLLME KLTPNERAAY VLREAFDYSY
PEIADVLGTT GAAVRQSVSR ARKHMARERR VSAPAAAQRE LLTKFIAAAR DGDMAALEQL
FAADVASVSD GNGRARVGRR PVVGASRVAK FLKAMSSWFW DGVEVLWVTT NGQTSALLRH
DGALWGMITV SVSGEHIDQV LWMFNPEKIT ARSLPPGLVL DGGFAEVTKA SP
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