| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7957 |
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| Symbol | |
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| ID | 8339335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 9230203 |
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| End bp | 9234177 |
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| Gene Length | 3975 bp |
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| Protein Length | 1324 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644961042 |
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| Product | Tetratricopeptide TPR_4 |
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| Protein accession | YP_003118621 |
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| Protein GI | 256397057 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG1192] ATPases involved in chromosome partitioning |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0918027 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCCTG ATCCGGACGG CACCGTCATC ACCTTCTACT CCTACAAGGG CGGCACCGGC
CGCACCATGG CCATGGCGAA CGTGGCGTGG ATCCTGGCCG CGAACGGCCA CCGGGTGCTG
GCGGTGGACT GGGATCTGGA CTCGCCGGGA CTGCACCGCT TCTACCATCC GTTCCTGCCG
CCGTCGGTGT TGCAGTCGGC CGGCGGGGTC ATCGATCTGA TCGTCGACTA CGCCTGGCAG
GTGCACCAGC ATCGGGAGGA CCGGCCGACG GACTGGCACC GGCAGGCCGC TGAAGTAGCC
CGGCACACAG TGGCCGTGGA CTGGCCGTTC CCCGGAGGCG GCGCCCTGGA CTTCCTGCCG
GCGGGCCGCC AGAACCGCGA CTACGCCTCG GCAATGGCGC CGCGCGGATG GGACGACTTC
TACGAGGAGA TGGGCGGCGG CCAGTTCTTC CAAGCGATGC GCGAGGGGAT GAAGGCGGCG
TACGACTACA TCCTCATCGA CAGCCGCACC GGCTTGTCAG ACATCGCCGA CATCTGCACG
CTCCAGCTGC CCGACGTGCT CGTGGACTGT TTCGCCCTCA GTGACCAGAA CATCGACGGC
GCGCTTGGGG TGGCGCAGCG AGTGCGGGAG CACCGTCTGG ATCGCCCTCT ACGCATCCTG
CCTGTGCCGA TGCGTGTCGA TGAGGCGGAG AAGGTGAAGG CGGATGCCGG GCGTGCTTTA
GTGGCGTCCC GGTTCGCCGG GTTCCCCGCC GGCATGGACG ATGAGCGCCG GTCGCAGTAC
TGGGCCTCTG TAGAGATCCC CTATCGGCCC TTCTATGCGT ATGAGGAGAC CCTGGCGGTC
TTCGGCGACA CACCCGGACT ACCGACCTCG CTGTTGGCTG CCTTCGAGCG GCTGACGGCG
GAGATCACCG TGGGCCGTGT CACTGGTCTG CCCGCGATGG AGGAGACCCG GCGGCAGCGG
GTTCTGGAGG GGTTCACCAG ACGGCAGACC ACGAAGGTCC GTCCTCTGAT CCACTACGTC
GCCGAGGATC GGATGTGGGC CGACTGGGTC CGGGAGATCC TGGCGCAAGT AGAGGTGACT
GCGGACCTCG TCGGTGTGGG AATCGCTATA GCGAATTCCG ACGGAGTGTC CGAGGCGGGA
GTACCCGATG GGGACCGACA GGTTCTCGCC ATCACGTCGC ACTCGTATCT GCGTTCAGCC
GAGGTGCACG CCGACCTCCG CCGCCTCGGC GCGGGAACGC TGTCGGCCGA GGGGCGGTCT
CCGCAGCGCA TCACCGCGGT TCGTGTCGCG GACGTCCGGC TGCCCGCGCA GTACCAAGCG
AACCCGCCGA TCGACTTGGC ACGGCTCAGC GAGCCGGAGG CTGTGGAGAC GCTACTGCGC
GCCGTGGATC GGAACGCTTA TGCGCAGTGG CGTGCCCGCT CCCCTGATGC GTTGCCCTCC
GCGCGGACGC ACGGACCGCG CTTCCCCGGC GTCGACCCGC GCGTCTGGAA CCTGCGCGGC
CGCAACGCCA CCTTCACTGG ACGCGACGAC GTCCTCGAAC ACGTCCGCGA TCGGCTACTG
CACGGCTCGG CTGCGGGCTC CGCACTGCCA CAGGCACTGC ACGGTCTGGG AGGCGTCGGC
AAGACCCAGG TCGCCCTGGA GTACGCGCAC CGGTTCAAAG GCGACTACGA CCTCGTGTGG
TGGCTCTCTG CGGACCAGCC GGAGCTGATC CCCACGGAGC TCGCACGCTT GGCTCGCCCG
CTGGGCTTGG GACCGCGCGC GGACAGCGGT ATCGCCGAGA CTGCGGAAGC TGTACTGGAG
GCGCTGCGGC GCGGGGATCC GGTGCGCCGC TGGCTGCTGG TCTACGACAA CGCCGACGAG
CCCGGTGCGG TGCGTCCGTT CTTACCGGAG AGCCGGCACG GACATGTGCT GATCACATCG
CGGAATCCGG CATGGACTCA GGAGGCGGCG CCGGTCGAGG TGGAGGTGTT CACGCGCGCC
GAGAGCGTGG AGCACCTGCG GCGGCGAGTC CCTGGGCTGG CCGTGGAGGA CGCTGGCGCG
CTGGCCGTCG CGCTCGGCGA CCTGCCGTTG GCAGTCGAGC AAGCGGCGGC ATGGCTCACC
GAAACCGGAA CTCCGGTCGG CGAGTACCTG GCGGAGCTGG ACCGGCAGGC GTCGGCAGTG
CTGGCGCTGA ATCAGCCCGG GGACTACCCG GTGCCTGTGG CGACGACGTG GACTATCTCC
TTCGAGGCGC TGCGCGACCG CTCCCCAGCG GCAGTTCGGC TCCTGCAACT GTGTTCGTTC
CTGGCGCCGG AGCCGGTGTC GATGGCGCTG CTGCGCTCGG ACGAGATGAT CCAGGCCCTG
ATCCCGCACG ACGAGGCGCT GCGCGACCGG ATGATGATCG GGCGCGTGGT CCGCGAGGTC
GGGCGGTTCG CGCTGGCACG AGTGGACGCC GCCTCGAACA CGCTGCAGGT GCACCGCCTG
GTGCAGTCGG TGATCCGGGC CCGGATGAGC GAGGCGGACC AGGAGCAGGC ATGCCACGAG
GTGCACCGGG TGCTGGTCGG CGCGCGCCCC AGAGCCGGGG ACACCGACGA CCCGGAGAAT
TGGCCGCGCT ATGACCAGAT CTGGGCACAC CTGGGACCGA GCCGGGCACG GCTGTGTGCC
GAGGGCGAGA CGCTGCAACT GCTGATCGAC CGGGTCCGGT ACCTGTGGAA GCGCGGGGAG
CTGGGAGCGG CGCTGGCGTT CGCCGAGGAG CTGGCCGCCG TGTGGACGTC GCGGGGGCGA
TCGCCGGACA AGGATCCGGA CCTACTGTCG CTGCGGTTCC AGACCGCGAA CGTGCTCTGG
TCGATGGGCC GCTTCGAAGA GGCGCGGGCG ATCAACGCCG AGGTGCTGCG CGCGCAGGCC
GCCGCGCTAG GCAACGATCA CCGGCACACC CTGATGACCG CCGGCGGACT GGCGGCGGCG
CTGCGCGGGC TCGGGCGGTT CGAGGAGGCG CTGGCGCTGG ATGAGCAGAC TTATGCGCGG
TTCGCTGAGA ACTTCGGTGT GGACTTCCCG CAGGCGCTCT CCTCCGCGAA CAACCTGGCT
ATCTCCTATC GGCTGGTCGG CGAGTTCTCC AAGGCGATGG AGATGGACCG GGAGGTCTTC
GCCCGGCGCC GGGAGGTACT CGGGGCAGGG CATCCCTACA CGCTGAGCTC CGCAGGGTCG
CTGGCCCGAG ACATGATCGA CGCGGGACGG TTCACGGAGG CAGTGGAGCT GTTGCGCGCG
ACCTTGGACA TGTATCGCGA CGTACTAGGC GACGACTTCG CCGAGACCCT CCGTACCGCT
AAGAGCTTGG CGGTGGCACT CCGCAAAAGC GGGCGGCTTG CCGAGGCTCA GGAGCTGACC
CAGTCCACAT ACGAGCGATA CCTCCAGCGA TTCGGCCCGC GGCATCCCGA CACGCGCGCC
TGTGCGCTGA ACCGCGCGGC GGACTTGGCG GCGCAGGACC GGGACGCGGA GGCGGTCACG
ATCAGCGCAG AATGCCTAGC TACGTATGAG GAGGAGCTAG GGGAACAGCA TCCCTATACG
CTCGCGGCAG TGAACAACCT GGCGGTCTAT GAGCGGGCCG CCGGCGCCGT GACCCGTGCT
CGAACACACG CTGAGCGCAC ACTGTCCGGC TTCGACGCCG CTCTAGGCGC ATCCCACCCC
TTCACACTCG CCGCAGCGGG CAACCTCGCG AACTGCCTAG CGGACGACGG CGAACTGGCT
GCGGCTTCCT CGCTAGAGGA TCGCGTCCTC ACCGGCACAC GGGACCGCCT AGGCGATGAC
CACGTCTACA CACTCACAGC GGAGGCGAAC CACGCCGCGA CGCTGCGCGC GGCAGGCCGC
AGCATGGAGG CCGAGGTCAC CACGGCACGC TGCCTCGACC GGCTCGCCAC GCTGTTGGGT
GGGGAGCATC CCGTGTGCCT GCGGGTACGG GCCGGGGCGC GAATCGGGAG AGATCTGGAG
GCCGCGGCGT ACTAG
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| Protein sequence | MSPDPDGTVI TFYSYKGGTG RTMAMANVAW ILAANGHRVL AVDWDLDSPG LHRFYHPFLP
PSVLQSAGGV IDLIVDYAWQ VHQHREDRPT DWHRQAAEVA RHTVAVDWPF PGGGALDFLP
AGRQNRDYAS AMAPRGWDDF YEEMGGGQFF QAMREGMKAA YDYILIDSRT GLSDIADICT
LQLPDVLVDC FALSDQNIDG ALGVAQRVRE HRLDRPLRIL PVPMRVDEAE KVKADAGRAL
VASRFAGFPA GMDDERRSQY WASVEIPYRP FYAYEETLAV FGDTPGLPTS LLAAFERLTA
EITVGRVTGL PAMEETRRQR VLEGFTRRQT TKVRPLIHYV AEDRMWADWV REILAQVEVT
ADLVGVGIAI ANSDGVSEAG VPDGDRQVLA ITSHSYLRSA EVHADLRRLG AGTLSAEGRS
PQRITAVRVA DVRLPAQYQA NPPIDLARLS EPEAVETLLR AVDRNAYAQW RARSPDALPS
ARTHGPRFPG VDPRVWNLRG RNATFTGRDD VLEHVRDRLL HGSAAGSALP QALHGLGGVG
KTQVALEYAH RFKGDYDLVW WLSADQPELI PTELARLARP LGLGPRADSG IAETAEAVLE
ALRRGDPVRR WLLVYDNADE PGAVRPFLPE SRHGHVLITS RNPAWTQEAA PVEVEVFTRA
ESVEHLRRRV PGLAVEDAGA LAVALGDLPL AVEQAAAWLT ETGTPVGEYL AELDRQASAV
LALNQPGDYP VPVATTWTIS FEALRDRSPA AVRLLQLCSF LAPEPVSMAL LRSDEMIQAL
IPHDEALRDR MMIGRVVREV GRFALARVDA ASNTLQVHRL VQSVIRARMS EADQEQACHE
VHRVLVGARP RAGDTDDPEN WPRYDQIWAH LGPSRARLCA EGETLQLLID RVRYLWKRGE
LGAALAFAEE LAAVWTSRGR SPDKDPDLLS LRFQTANVLW SMGRFEEARA INAEVLRAQA
AALGNDHRHT LMTAGGLAAA LRGLGRFEEA LALDEQTYAR FAENFGVDFP QALSSANNLA
ISYRLVGEFS KAMEMDREVF ARRREVLGAG HPYTLSSAGS LARDMIDAGR FTEAVELLRA
TLDMYRDVLG DDFAETLRTA KSLAVALRKS GRLAEAQELT QSTYERYLQR FGPRHPDTRA
CALNRAADLA AQDRDAEAVT ISAECLATYE EELGEQHPYT LAAVNNLAVY ERAAGAVTRA
RTHAERTLSG FDAALGASHP FTLAAAGNLA NCLADDGELA AASSLEDRVL TGTRDRLGDD
HVYTLTAEAN HAATLRAAGR SMEAEVTTAR CLDRLATLLG GEHPVCLRVR AGARIGRDLE
AAAY
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