Gene Caci_7946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7946 
Symbol 
ID8339324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9218366 
End bp9219304 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content74% 
IMG OID644961031 
Productdihydropteroate synthase 
Protein accessionYP_003118610 
Protein GI256397046 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0294] Dihydropteroate synthase and related enzymes 
TIGRFAM ID[TIGR01496] dihydropteroate synthase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATCGA ACGCGGACGG CACCCCCGGC GGCGCCACCG AGAGCGCCCC GGACCCGGCC 
GACGTCCCGC AGAGCACGCT GCGCCTGGGA GCCTACGAGT ACGGTCCCGA TCAGCGGCTC
GTGATGGCGA TCGTGAACCG CACCCCGGAC TCCTTCTACG ACAAGGGAGC CACCTTCACC
GACGCCGCCG CCCTGGACCG GGTCGAGCGG GCGTTGAGCG AGGGCGCGGA CCTCATCGAC
ATCGGCGGCG TGAAGGCCGG TCCCGGCGAC GCCGTGGACC TCGCCGAGGA GACGCGCCGC
GTCGTCCCCT TCGTCGCCGA GGTCCGCAAG CGGTTCCCGG AGGCGGTCAT CTCCGTGGAC
ACCTGGCGCG CCGAAGTCGG GGACGCGGTG TGCGCCGAGG GCGCCGACGT CCTCAACGAC
GCCTGGGGCG GCTGGGACCC GCGTCTGGCG GAGGTCGCAG CCCGGCACGC GGTGGCGCTG
GTGTGCACGC ACGCAGGGGG CGTGGAACCG CGCACCCGCC CGCACCGCGT CGGCTACGCG
GACATCATGG CCGACATCCT GGAGCGCACG GTCCACGGCG AGGCCGAGCG CGCGGCAGCC
CTCGGCGTCC CGCGCGACCG CATCCTGATC GACCCCGGCC ACGACTTCGG CAAGAACACC
CGCCACTCCC TGGAGGCGAC GCGCCGCCTG GCGGAGATGA CCGCGACCGG CTGGCCGGTC
CTGGTGTCGC TGTCGAACAA GGACTTCGTC GGCGAGACCC TGAACCGCCC GGTGAAGGAG
CGCCTGACCG GCACGCTCGC CACCACCGCG GTCTCGGCGT GGCTCGGCGC CCGGGTCTAC
CGGGTGCACG AGGTCGCCGA GACGCGGCAG GTGCTGGAGA TGGTGTCGGC GATCCAGGGA
CTGCGGGAGC CCGCGGTCGC CAAGCGGGGG CTAGCTTAG
 
Protein sequence
MSSNADGTPG GATESAPDPA DVPQSTLRLG AYEYGPDQRL VMAIVNRTPD SFYDKGATFT 
DAAALDRVER ALSEGADLID IGGVKAGPGD AVDLAEETRR VVPFVAEVRK RFPEAVISVD
TWRAEVGDAV CAEGADVLND AWGGWDPRLA EVAARHAVAL VCTHAGGVEP RTRPHRVGYA
DIMADILERT VHGEAERAAA LGVPRDRILI DPGHDFGKNT RHSLEATRRL AEMTATGWPV
LVSLSNKDFV GETLNRPVKE RLTGTLATTA VSAWLGARVY RVHEVAETRQ VLEMVSAIQG
LREPAVAKRG LA