Gene Caci_7944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7944 
Symbol 
ID8339322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9216902 
End bp9217687 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content72% 
IMG OID644961029 
ProductEnoyl-CoA hydratase/isomerase 
Protein accessionYP_003118608 
Protein GI256397044 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGACA ACGTTGTCTA CGACGTCACC GAGGGTGTCG GCACCATCAC CCTGAATCGC 
CCGGACGCGC TGAACTCGCT CGACAGTGCG ACCAAGGCGG CGCTGCGCGA CGCGGCGACG
GCGGCGGCCG GGGACGACTC CGTTCGCGTG ATCGTGCTGC GCGGTACCGG GCGCGCCTTC
TGCGTCGGAC AGGACCTCAG GGAGCACGCG GCGGCCCTGG AGTCGGGCAA CGGACTGGCG
AACACGGTGC GCGAACACTA CAACCCGCTG CTGCGCGCCC TGACCTCGGC GCCCAAGCCG
GTGATCGCGG CGGTCAACGG CGTGGCGGCC GGCGCCGGCG CGGCCCTGGC CTTCGCCTCC
GACCTGCGGA TCGCCTCGGA CAAGGCGGCC ATCAACCTGG CGTTCGCCAA CATCGGGCTG
ACCGCCGACT CCGGCGGCTC CTGGACGCTG CCGCGGCTGG TCGGGCCGGC CAAGGCACTG
GAGCTGCTGA TGCTGCCGGA GACCATCGGC ATCGAGCAGG CGGCCGAGCT GGGACTGGTG
CACCGGGTCG TGCCGGCCGA GGAGCTGGAC GCGGTGGTCG GCGAGTTGGC GGCGAAGATG
GCCGCCGGAC CGACCGCGGC GTACGCGGCG ATGAAGAAGG CGGTCGGCTT CGCGCTGACC
CACTCCCTCG ACGAGACCCT GGAGCTGGAG GCCGATCTGC AGGACGCGTG CGCGGCCACC
GAGGACCACC AGAACGCCGT GCGGTCCTTC CTGGCCAAGG AGAAGCCGAC CTTCACCGGG
CGCTGA
 
Protein sequence
MPDNVVYDVT EGVGTITLNR PDALNSLDSA TKAALRDAAT AAAGDDSVRV IVLRGTGRAF 
CVGQDLREHA AALESGNGLA NTVREHYNPL LRALTSAPKP VIAAVNGVAA GAGAALAFAS
DLRIASDKAA INLAFANIGL TADSGGSWTL PRLVGPAKAL ELLMLPETIG IEQAAELGLV
HRVVPAEELD AVVGELAAKM AAGPTAAYAA MKKAVGFALT HSLDETLELE ADLQDACAAT
EDHQNAVRSF LAKEKPTFTG R