| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7941 |
|---|
| Symbol | |
|---|
| ID | 8339319 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 9214479 |
|---|
| End bp | 9215285 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644961026 |
|---|
| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
|---|
| Protein accession | YP_003118605 |
|---|
| Protein GI | 256397041 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGATGA GTGCGGTACT GGAAATAGGA GGTGGGGACG TCGTGGCTGA CGCCAACAGC
GCCCGCAATC CTGGAGCCGT CCCGGTCAAC ACCATTGGAC CGCGGATAGA TCTCGGGGAA
CTTCGTCGGA GGCGTGCGGC CCGCAAGGCC GCCTTGGAGA AGAACCGCCG GGGGGCGGAG
GCGATCCCCG ATACCGCGAT GCCCGCCGAG GCAGCGCAGA GCGTGGGGGA GACCCAACCC
CTCGACGCCG CGGCCGTCGG CTGGGAGCCG CCGAGCTGGG ACGACATCGT CCGGACCCAT
TCGCAGCGGG TGTACCGGCT GGCCTACCGC CTGACCGGCA ACCAGCACGA CGCCGAGGAC
CTCACGCAAG AGGTCTTCAT CCGCGTCTTC CGCTCGCTGT CCAGCTACCA GCCGGGCACC
TTCGAGGGCT GGCTGCACCG CATCACGACG AACCTGTTCC TGGACATGGT GCGCCGCCGC
GCCCGCATCC GCTTCGACTC CCTGGGCGAG GACGCCGACG ACCGGCTGCC CGGCCGCGAG
CCCTCGCCGG AGCGGATCTT CGTGGACTCG CACATGGACG CCGACATCGA GGCCGCGCTG
GCCGCGCTGG CGCCGGAGTT CCGGGCGGCC GTGGTGCTGT GCGACATCGA GGGGTTGTCC
TACGAGGAGA TCGCGGCCAC CCTCGATGTG AAGCTCGGCA CCGTGCGCTC GCGGATCCAC
CGCGGCCGCT CGCAGCTGCG AGCGGCCCTG GAGCACCGGG CCCCGGGCGC GGCCGCGAAC
GCGAGTGGGA AGGAGGGCCG CCGGTGA
|
|---|
| Protein sequence | MVMSAVLEIG GGDVVADANS ARNPGAVPVN TIGPRIDLGE LRRRRAARKA ALEKNRRGAE
AIPDTAMPAE AAQSVGETQP LDAAAVGWEP PSWDDIVRTH SQRVYRLAYR LTGNQHDAED
LTQEVFIRVF RSLSSYQPGT FEGWLHRITT NLFLDMVRRR ARIRFDSLGE DADDRLPGRE
PSPERIFVDS HMDADIEAAL AALAPEFRAA VVLCDIEGLS YEEIAATLDV KLGTVRSRIH
RGRSQLRAAL EHRAPGAAAN ASGKEGRR
|
|---|
| |