Gene Caci_7933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7933 
Symbol 
ID8339311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9207490 
End bp9209103 
Gene Length1614 bp 
Protein Length537 aa 
Translation table11 
GC content73% 
IMG OID644961018 
Producthypothetical protein 
Protein accessionYP_003118597 
Protein GI256397033 
COG category[S] Function unknown 
COG ID[COG5282] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03624] putative hydrolase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACAAGA ACCCCGAAGA TCACAACCCC TCGGACGGCG ACGAGTCGCA GAACCAGGGT 
AAGCGCCCGG ACGGTCCCGT TGATCCGTTG GGGGCCATGT TCCAGCAGAT GTTCGGCGGA
AGCGGGGCGC AGTCCCCGGG CTCGAACATC CCGGGCATGC CGGACCCGCA GATGCTGCAG
ATGGTGTTCA GCCAGATCCA GGCCCTGATG AGCGGCGGCG GCGACGGCGC GGTGAACTGG
GACCTGGCCA AGACCATGGC GCGCAACGCC GTGGCCGCCG CCGGCCCGGA CCCCTCGCCC
ACCGACGGCG AGCAGCGCAC CTACGACGGC GCCGTCCAGC TCGCCGAGCA CTGGCTGGAC
CAGGTCACCT CGCTCCCGGC GGGCACCTCC GGCACCCGCG TGTGGTCCCG CGCGCAGTGG
ATCGAGGAGA CGCTCCCGGT CTGGAAGCAG CTGGTCGAGC CGGTCGCCGA GCGCATCACC
TCGGCGATGG GCGAGGCGGT CGGCGGCGCC GTCGGCGAGC TGGGCATGCC GGAGAACCCG
GAGGCGGCCG GCCTGCCGCC GGGCATGGGC GACATGCTGG GCAACCTGTT CGGCGGCGCC
GCGGGCGGTG CCGGCGGCGG GGCGAACCCG CTGGGCGGGA TGCTCAAGCA GATGGGCACC
GCGATGTTCG GCTCCCAGGT CGGCCAGGCG CTGGCCTCGC TGGCCGGCGA GGTCGTGTCC
GGCAGCGACA TCGGGCTGCC GCTGGGCCCG GAGGGCAAGG CGGTGCTGCT CCCGGCGAAC
GTGGACGTCT TCGCCGAAGG ACTCGAGGTC GACATCGACC AGGTCCGGCT GTACCTGGCG
CTGCGCGAGG CCGCCTACCA GCGGCTGTTC TCGCACGTCC CGTGGCTCAA GCCCCGGCTG
CTCGGCGCGG TCGAGGAGTA CGCGCGCGGC ATCACGGTCG ACGCCTCCAA GTTCAGCGAG
CTGGCGCAGC AGGCCGAGCA GATGGACCTG ACCAACCTGG ACCCCTCGCA GCTGGAGAAC
ATGCTCGGCG GCGGCGGACT GTTCACCCCG GTGGACTCCC CGGCGCAGAA GGCGGCACTG
GCCCGGCTCG AGACGCTGCT GGCCCTGGCT GAGGGCTGGG TCGACGCGGT GGTGCACGCC
GCGGCAGCGC CGCAGCTGTC GGCGGCGGAC GCGCTGCGCG AGACGCTGCG GCGGCGGCGC
GCGGCCGGCG GTCCGGCGGA GCAGACGTTC TCGGCGCTGG TCGGCCTGGA GCTGCGCCCG
CGGCGGCTGC GCGACGCGTC CCGGCTGTGG GCGTCGCTGG CCGACGCGCG CGGGCTGGAG
GGGCGCGACG CGGTCTGGTC GCACCCGGAC CTGCTGCCGA CGTCCGCCGA CCTGGACGAC
CCGGACGGGT TCGTGCACGG CCGGGACGCC GAGGACGGGA TGGAGTTCGA CTTCTCGGGG
CTGGACGAGC TGCTGGGCGG CGGGACCGGC ACGACCGGGG CGAAGGACGG CGGGGCTGTG
GATAACGGCC CTGTGGATAA CGAGAAGGAC GACAAGAGCT CGGACGAGGA CGGCAAGGGC
GGCGAGGGCG ACAAGGGCTC GGACGAGGAC GGCGAAGACA AGCCGAAGCA GTAG
 
Protein sequence
MNKNPEDHNP SDGDESQNQG KRPDGPVDPL GAMFQQMFGG SGAQSPGSNI PGMPDPQMLQ 
MVFSQIQALM SGGGDGAVNW DLAKTMARNA VAAAGPDPSP TDGEQRTYDG AVQLAEHWLD
QVTSLPAGTS GTRVWSRAQW IEETLPVWKQ LVEPVAERIT SAMGEAVGGA VGELGMPENP
EAAGLPPGMG DMLGNLFGGA AGGAGGGANP LGGMLKQMGT AMFGSQVGQA LASLAGEVVS
GSDIGLPLGP EGKAVLLPAN VDVFAEGLEV DIDQVRLYLA LREAAYQRLF SHVPWLKPRL
LGAVEEYARG ITVDASKFSE LAQQAEQMDL TNLDPSQLEN MLGGGGLFTP VDSPAQKAAL
ARLETLLALA EGWVDAVVHA AAAPQLSAAD ALRETLRRRR AAGGPAEQTF SALVGLELRP
RRLRDASRLW ASLADARGLE GRDAVWSHPD LLPTSADLDD PDGFVHGRDA EDGMEFDFSG
LDELLGGGTG TTGAKDGGAV DNGPVDNEKD DKSSDEDGKG GEGDKGSDED GEDKPKQ