Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7933 |
Symbol | |
ID | 8339311 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 9207490 |
End bp | 9209103 |
Gene Length | 1614 bp |
Protein Length | 537 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644961018 |
Product | hypothetical protein |
Protein accession | YP_003118597 |
Protein GI | 256397033 |
COG category | [S] Function unknown |
COG ID | [COG5282] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR03624] putative hydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACAAGA ACCCCGAAGA TCACAACCCC TCGGACGGCG ACGAGTCGCA GAACCAGGGT AAGCGCCCGG ACGGTCCCGT TGATCCGTTG GGGGCCATGT TCCAGCAGAT GTTCGGCGGA AGCGGGGCGC AGTCCCCGGG CTCGAACATC CCGGGCATGC CGGACCCGCA GATGCTGCAG ATGGTGTTCA GCCAGATCCA GGCCCTGATG AGCGGCGGCG GCGACGGCGC GGTGAACTGG GACCTGGCCA AGACCATGGC GCGCAACGCC GTGGCCGCCG CCGGCCCGGA CCCCTCGCCC ACCGACGGCG AGCAGCGCAC CTACGACGGC GCCGTCCAGC TCGCCGAGCA CTGGCTGGAC CAGGTCACCT CGCTCCCGGC GGGCACCTCC GGCACCCGCG TGTGGTCCCG CGCGCAGTGG ATCGAGGAGA CGCTCCCGGT CTGGAAGCAG CTGGTCGAGC CGGTCGCCGA GCGCATCACC TCGGCGATGG GCGAGGCGGT CGGCGGCGCC GTCGGCGAGC TGGGCATGCC GGAGAACCCG GAGGCGGCCG GCCTGCCGCC GGGCATGGGC GACATGCTGG GCAACCTGTT CGGCGGCGCC GCGGGCGGTG CCGGCGGCGG GGCGAACCCG CTGGGCGGGA TGCTCAAGCA GATGGGCACC GCGATGTTCG GCTCCCAGGT CGGCCAGGCG CTGGCCTCGC TGGCCGGCGA GGTCGTGTCC GGCAGCGACA TCGGGCTGCC GCTGGGCCCG GAGGGCAAGG CGGTGCTGCT CCCGGCGAAC GTGGACGTCT TCGCCGAAGG ACTCGAGGTC GACATCGACC AGGTCCGGCT GTACCTGGCG CTGCGCGAGG CCGCCTACCA GCGGCTGTTC TCGCACGTCC CGTGGCTCAA GCCCCGGCTG CTCGGCGCGG TCGAGGAGTA CGCGCGCGGC ATCACGGTCG ACGCCTCCAA GTTCAGCGAG CTGGCGCAGC AGGCCGAGCA GATGGACCTG ACCAACCTGG ACCCCTCGCA GCTGGAGAAC ATGCTCGGCG GCGGCGGACT GTTCACCCCG GTGGACTCCC CGGCGCAGAA GGCGGCACTG GCCCGGCTCG AGACGCTGCT GGCCCTGGCT GAGGGCTGGG TCGACGCGGT GGTGCACGCC GCGGCAGCGC CGCAGCTGTC GGCGGCGGAC GCGCTGCGCG AGACGCTGCG GCGGCGGCGC GCGGCCGGCG GTCCGGCGGA GCAGACGTTC TCGGCGCTGG TCGGCCTGGA GCTGCGCCCG CGGCGGCTGC GCGACGCGTC CCGGCTGTGG GCGTCGCTGG CCGACGCGCG CGGGCTGGAG GGGCGCGACG CGGTCTGGTC GCACCCGGAC CTGCTGCCGA CGTCCGCCGA CCTGGACGAC CCGGACGGGT TCGTGCACGG CCGGGACGCC GAGGACGGGA TGGAGTTCGA CTTCTCGGGG CTGGACGAGC TGCTGGGCGG CGGGACCGGC ACGACCGGGG CGAAGGACGG CGGGGCTGTG GATAACGGCC CTGTGGATAA CGAGAAGGAC GACAAGAGCT CGGACGAGGA CGGCAAGGGC GGCGAGGGCG ACAAGGGCTC GGACGAGGAC GGCGAAGACA AGCCGAAGCA GTAG
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Protein sequence | MNKNPEDHNP SDGDESQNQG KRPDGPVDPL GAMFQQMFGG SGAQSPGSNI PGMPDPQMLQ MVFSQIQALM SGGGDGAVNW DLAKTMARNA VAAAGPDPSP TDGEQRTYDG AVQLAEHWLD QVTSLPAGTS GTRVWSRAQW IEETLPVWKQ LVEPVAERIT SAMGEAVGGA VGELGMPENP EAAGLPPGMG DMLGNLFGGA AGGAGGGANP LGGMLKQMGT AMFGSQVGQA LASLAGEVVS GSDIGLPLGP EGKAVLLPAN VDVFAEGLEV DIDQVRLYLA LREAAYQRLF SHVPWLKPRL LGAVEEYARG ITVDASKFSE LAQQAEQMDL TNLDPSQLEN MLGGGGLFTP VDSPAQKAAL ARLETLLALA EGWVDAVVHA AAAPQLSAAD ALRETLRRRR AAGGPAEQTF SALVGLELRP RRLRDASRLW ASLADARGLE GRDAVWSHPD LLPTSADLDD PDGFVHGRDA EDGMEFDFSG LDELLGGGTG TTGAKDGGAV DNGPVDNEKD DKSSDEDGKG GEGDKGSDED GEDKPKQ
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