Gene Caci_7911 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7911 
Symbol 
ID8339288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9182876 
End bp9183670 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content73% 
IMG OID644960995 
ProductABC transporter related 
Protein accessionYP_003118575 
Protein GI256397011 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGACG GACTCACCCC CGGCGCCGCG GACCCGGTGT CCGACGGCCG CACGCCCGCC 
GCCCGCACGC CCGACGTGCT CACCCTGACC GGACTGTCCT GGTCGGTCGG CGGCTCGGCG
ATCCTGTCCG GCGTGGACCT CGCGGTCGGC GAGGGCGAGT TCGTCGCCGT GATCGGCCCG
AACGGCGCCG GCAAGACCTC GCTGTTCAAC CTGATCAGCG GCCTCAATCG AGCCAGCGCC
GGCCGGATCT TTCTGGACGG CGCCGACATC ACCACCGAGG CGCCGCACAA GCGGGCCCGA
CGCGGGATCG GCCGGACGTT CCAGGCCTCG AGCGTCTTCC CGACCATGAC GGTCGCGGAG
CATGTGGCGC TGGCCGGGCA GGTCGCGGCC AAACGCCACG CTCTCAGTCG GGCCGCCACC
GGCGCCGACG TGCTGGAACG GGTCCGCCTG ACCGAGAAGT CCGGGGCGCT CGCCGCCGAC
CTCTCCCACG GCGACAAGCG CAAGCTCGAA CTCGCCATGC TCCTGGCCTC CGGCGCCGAA
CGGCTGCTGC TCCTGGACGA GCCGATGGCC GGCGTCGCGT CCGGCGACGT CCCCGAACTG
GTCGACGTCA TCAGGACCCT GCACCGCGCC GAGGGCCGCA CGGTCCTGAT GGTCGAGCAC
CACATGGAGG TCCTGCTCGG CCTCGCCGAC CGCGTCGCGG TGATGCACCA CGGCGCCCTG
CTCGCGATCG ACACCCCGGC CCGCATCATG GCCGACGCCC GGGTCCAGGA GGCATACGTG
GGGGACGCGC TGTGA
 
Protein sequence
MADGLTPGAA DPVSDGRTPA ARTPDVLTLT GLSWSVGGSA ILSGVDLAVG EGEFVAVIGP 
NGAGKTSLFN LISGLNRASA GRIFLDGADI TTEAPHKRAR RGIGRTFQAS SVFPTMTVAE
HVALAGQVAA KRHALSRAAT GADVLERVRL TEKSGALAAD LSHGDKRKLE LAMLLASGAE
RLLLLDEPMA GVASGDVPEL VDVIRTLHRA EGRTVLMVEH HMEVLLGLAD RVAVMHHGAL
LAIDTPARIM ADARVQEAYV GDAL