Gene Caci_7910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7910 
Symbol 
ID8339287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9182052 
End bp9182879 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content71% 
IMG OID644960994 
ProductABC transporter related 
Protein accessionYP_003118574 
Protein GI256397010 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCCTCG AACTCGACGA CGTGCGCGTC ACCCTCGGCG GCTCGCACAT CCTGCAAGGC 
GTCTCCTTCA CGGTGGCGCC GACCGGCGTG ACCGCGCTGC TCGGCCGCAA CGGCGTCGGC
AAGACGACGA CGGTCAAGGC GATCCTCGGC CTGGTCCCGC GCACCGGCAC CATCGCCTTC
GGCGGCGCCC CGGTCCACCG CCTGCGCACC CACGAGATCG TCCGCCGCGG CATCGGCTAC
GCCCCCGAGG ACCGCTGCGT CTTCGCCAAG CTGACCGTCA CCGAGAACCT GGCTCTGGCC
GAGCGCCGAG GCAGCGACCA CGCCTACGAC CTGGTCTACG AACTCTTCCC GGAGCTCAAG
ACCCGCGGCG CGCAGGAGGC CGGCACGCTG TCCGGCGGCC AGCAGCAGAT GGTCGCCATC
GCCCGCACCC TCCTCAACGA CAACCGCCTG ATCGTGGTCG ACGAACCGAC GAAGGGCCTC
GCCCCGAAGG TGGTGACCGA AGTGGCGGAG GTCCTCGAAC GCGCCGCCGA ACGCGTCCCG
ATGCTGCTGG TCGAGCAGAA CCTCGCCCTG GTGCGCCGGC TCTCCGGCGA CTGCGTGGTC
CTGGCCGCCG GGCAGGTGGT GCACCGCGGT CCGGTGCGCG AGCTGTTGGC GGACGCGGCG
CTGACGCAGG AACTGCTCGG CGTCGGGCAG GCGCGCGGTG AGAACGCACC CCCGCTCTCA
CACTCCGCCC CATCCAGGGG GACTACCCAC CCTCAGCTCA TTGTCAAGGA TGGTCAACCG
CCGAAAGAAG TGTCGCAGCC GGAATCCACC CGATCGGACG CGCCGTGA
 
Protein sequence
MILELDDVRV TLGGSHILQG VSFTVAPTGV TALLGRNGVG KTTTVKAILG LVPRTGTIAF 
GGAPVHRLRT HEIVRRGIGY APEDRCVFAK LTVTENLALA ERRGSDHAYD LVYELFPELK
TRGAQEAGTL SGGQQQMVAI ARTLLNDNRL IVVDEPTKGL APKVVTEVAE VLERAAERVP
MLLVEQNLAL VRRLSGDCVV LAAGQVVHRG PVRELLADAA LTQELLGVGQ ARGENAPPLS
HSAPSRGTTH PQLIVKDGQP PKEVSQPEST RSDAP