Gene Caci_7900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7900 
Symbol 
ID8339276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9171956 
End bp9172603 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content69% 
IMG OID644960983 
Productprotein of unknown function DUF1211 
Protein accessionYP_003118564 
Protein GI256397000 
COG category[S] Function unknown 
COG ID[COG3548] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGGACCG TGCCCGAGAG CTCGGAGGAC GATCCGGATG CGGAGGGGTC CGTCCAGAGC 
CCGGATCGGT TGATCACACT GGCCGACGGG ATCTTCGCGA TCGCGATGAC CCTGCTCGTC
CTGAACATCT CCGTACCGTC CGGGCTGGAC CACGACCACT TCCGGTCCTC ACTGCACGAA
ACGTGGTCAC GGCTGGCCAC CTACGCCCTC AGCTTCGCGA TCATCGGCGG CCAGTGGCTG
GACCATCACC GCGTCTTCCG GCTGGTCAAG CGCACCAACA CCGTCGTGGT GCGGCTGACC
CTGCTCCTGC TCGGGCTGGT GGCGCTGCTG CCGTTCCCGA CCGCGCTGCT GTCGGACTAC
GGAGGGCACG AACCGTTGGC CGTCGTCTAC TACGCGGTCA CCGTCGGCGC CATCAATCTG
CTGCTGCTGG GGCTCTTCCT CACCGTCCGC AACGACGAGC GGCTGCAGGC CCGGCCCATC
TCCGACCGCT TCGCCCGCGG CATGATCGCC GACTGCGGGG CGACCATCGC GATCGCGGCG
GTCGCGGTCC TGGTCGCCCT CACCGTCTCG GCCGGCGCCG GGCTGTTCAC CTGGCTCGCG
GCGTTCCCTG CCGGGATGGC CTCCAGGCGT CTGCGCAAAG AGTCCTGA
 
Protein sequence
MGTVPESSED DPDAEGSVQS PDRLITLADG IFAIAMTLLV LNISVPSGLD HDHFRSSLHE 
TWSRLATYAL SFAIIGGQWL DHHRVFRLVK RTNTVVVRLT LLLLGLVALL PFPTALLSDY
GGHEPLAVVY YAVTVGAINL LLLGLFLTVR NDERLQARPI SDRFARGMIA DCGATIAIAA
VAVLVALTVS AGAGLFTWLA AFPAGMASRR LRKES