Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7900 |
Symbol | |
ID | 8339276 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 9171956 |
End bp | 9172603 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644960983 |
Product | protein of unknown function DUF1211 |
Protein accession | YP_003118564 |
Protein GI | 256397000 |
COG category | [S] Function unknown |
COG ID | [COG3548] Predicted integral membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGGACCG TGCCCGAGAG CTCGGAGGAC GATCCGGATG CGGAGGGGTC CGTCCAGAGC CCGGATCGGT TGATCACACT GGCCGACGGG ATCTTCGCGA TCGCGATGAC CCTGCTCGTC CTGAACATCT CCGTACCGTC CGGGCTGGAC CACGACCACT TCCGGTCCTC ACTGCACGAA ACGTGGTCAC GGCTGGCCAC CTACGCCCTC AGCTTCGCGA TCATCGGCGG CCAGTGGCTG GACCATCACC GCGTCTTCCG GCTGGTCAAG CGCACCAACA CCGTCGTGGT GCGGCTGACC CTGCTCCTGC TCGGGCTGGT GGCGCTGCTG CCGTTCCCGA CCGCGCTGCT GTCGGACTAC GGAGGGCACG AACCGTTGGC CGTCGTCTAC TACGCGGTCA CCGTCGGCGC CATCAATCTG CTGCTGCTGG GGCTCTTCCT CACCGTCCGC AACGACGAGC GGCTGCAGGC CCGGCCCATC TCCGACCGCT TCGCCCGCGG CATGATCGCC GACTGCGGGG CGACCATCGC GATCGCGGCG GTCGCGGTCC TGGTCGCCCT CACCGTCTCG GCCGGCGCCG GGCTGTTCAC CTGGCTCGCG GCGTTCCCTG CCGGGATGGC CTCCAGGCGT CTGCGCAAAG AGTCCTGA
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Protein sequence | MGTVPESSED DPDAEGSVQS PDRLITLADG IFAIAMTLLV LNISVPSGLD HDHFRSSLHE TWSRLATYAL SFAIIGGQWL DHHRVFRLVK RTNTVVVRLT LLLLGLVALL PFPTALLSDY GGHEPLAVVY YAVTVGAINL LLLGLFLTVR NDERLQARPI SDRFARGMIA DCGATIAIAA VAVLVALTVS AGAGLFTWLA AFPAGMASRR LRKES
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