Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7898 |
Symbol | |
ID | 8339274 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 9168318 |
End bp | 9170879 |
Gene Length | 2562 bp |
Protein Length | 853 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644960981 |
Product | protein of unknown function DUF214 |
Protein accession | YP_003118562 |
Protein GI | 256396998 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGAAGG CATCCCGCCG CAATTTCTTC GCGCACAAGG GCCGGCTGTG GCTGTCCCTG GTCGCCGTCG TGCTGAGCGT GGCGTTCGTC ACCGGCACCC TGATGTTCAC CTCGACCATC ACCACCACCT TCGACCGGCT GTTCGCCACC ACCGCCTCGG ACGTCGCGGT GTCGGCCAAG GTCGACAAGG ACGCCGCGCC CGGCTCGCCG GAGCAGACCG TCTCGGCCTC CGTGCTGGAC GGCGTCAAGG CACTGCCGGG CGTGCAGGCC GTCTACGGTG ACATCACCAC CGACCGCCTG GCCGTGGTCG GCGCGGACAA CAAGGCCATC TCCAACTCCG CCGGCGGCCC GACCATCGGC GCGAACTGGT ACGCCACGCC GCACCCGGCG GTGAATCTGA CCTCCGGCCG CCCGCCGGCC GGACCCGGCG ACGTCGTCGT CGACGCGGAC ACCGCCGCCA AGAAGCACCT GGCGCTCGGC TCGCCGCTGC GCGTCGTGAC CGGCACCGAC GCCGGCACCT TCCAGGTGAC CGTCAGCGGG ATCGCGACCT TCCGGACCAC CAACCCCGGC GAGACGCTGT TCTACTTCGA CACCAACACC GCGCAGACCA AGCTGCTGGG CAAGCCCGGC GTGTTCACCG GCGTGGACCT GGACGCCAAG CCCGGCACCG CCGACGACAC GCTCAAGTCC GAGGTGTCCG CCAAGCTCGG CGCCGGCTAC GACGTGAAGA CCCGGGCCGA GCAGGAGGCC GACGGCCGCA ACAGCGTGGG CTTCATCGGC TTCATGAAGT ACGTGATGCT CGGCTTCGCC GGGATCTCGC TGATGGTCGG CGCGTTCCTG ATCGTCAACA CCTTCCAGAT GCTCGTGGCG CAGCGCACCC GCGAACTGGG CCTGCTGCGG GCGCTGGGCG CCAGCCGCCG GCAGGTCAAC CGCTCGGTCC GGCTCGAGGC GCTGCTGCTC GGCGTCATCG GCGCCTCCCT GGGTATCGCC GCCGGCGCCG GCCTGGCCTA CGGCCTGATC GCCGTCATGA ACGGCGTCGG GATGAACCTG CAGGCCTCCG ACATGTCGGT GACCCCGACC GCGGTGATCG CCGGCTACGC GGTCGGCGTG CTGGTCACCC TGCTCGCGGT CTGGATCCCG GCCCGCCGCG CGGCCCGCAT CACGCCGATG GCGGCGCTGC GCGACGCCGG GACGCCGGGG GACCGCCGGT CCTCGTGGCT GCGCAACGGC ATCGGTCTGG CCATCATCGG CGGCGGCGCC GCGGCGCTGA TCGGCGGCGC GGCCAACGGC GCCTCGGCAG CCGGGGGGCT GCTGCTGGGC CTGGGCGTGC TGGTCACCCT GATCGGCGCG ATCCTGCTCG GCCCGCTGCT GGCCGGCGTG GTGATCCGGG TGCTCGGCGT CTGGATGCCG GCGGCCTACG GCTCGGTCGG CACCATGGCG CAACGCAACG CCCTGCGGAA CCCGCGCCGC ACCGGCGCCA CCGCCGCGGC CCTGATGATC GGGCTGTCGC TGGTCTCCGG GATGGCCGTG GTCGGCTCCT CGCTGGTCAC CTCGGCGACC GCCGAGATGG ACCGCAGCGT CGGCGCCGAC TACATCATCA CCACCAACGG CGGTCTGGTG ATCACCCCCG AGGTGCTGGC CAAGACCGAG GCGACGCCGG GCCTGGCGCA CGTCACGGAG AACAAGTTCC TGGACGCCAC GGTCTCCGGC TCCTCCGGCG ACGGCAAGAT GCAGATCGCG GCGGCCTCGC CGACCATGGT CCAGGACTTC GACGCCACCA CCACCGCGGG CTCGCTGTCC GAGGTGTTCA CCAAGCCGGG CATCGCGATC CCGGCAGCCG AGGCCAAGTC GCGCAACGCG AGCGTCGGCT CGGTCGTGAC CGTCACCGTC CACGGCGGCA CGCCGGTCAA GCTGCCGGTG CTGGCCATCC TGAGCGACAA GACAGTGTTC AACCACGGTG ACGGCTACAT CTCCCTGGAC ACCCTGAGCA AGTCGCTGCC GGCTTCGGCG CAGCCCGACG ACCTGATGCT GTTCGCCAAG GCCGACAAGG GCCAGCAGGA CAAGGCCTAC CAGGCGCTCA AGGACGGCCT GGCGCCCTTC CCGCAGGTGA CGGTCAAGAG CCAGACCGAC TACAAGAAGC TGATCCACGA CCAGGTCGGC GGCGTGCTGA ACATGGTCTA CGGGCTGCTG GGCCTGGCGA TCGTGGTGGC GATCCTGGGC GTGGTCAACA CCCTGGCGCT GTCGGTGGTG GAGCGCACCC GCGAGATCGG CCTGATCCGG GCGATCGGTA TGGGACGCCG CAAGACCCGC CGCATGATCC GCCTGGAGTC GGTGGTGATA GCGCTGTTCG GCGCGGCTCT GGGTGTCGGG CTGGGTCTGG CCTGGGGAGT GGCCGCGCAG CGGGTGCTGT CCGGGATCGG TATCAGCACC CTGGCCATCC CGGTGGGCAC CATCGTCGCG GTCTTCTTCG GTGCCGCGGT GGTCGGCCTG CTGGCCGCGC TCGCGCCGGC CTTCCGGGCC TCGCGGATGA ACGTGCTGCG GGCGATCGCG GCCGACGGCT GA
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Protein sequence | MWKASRRNFF AHKGRLWLSL VAVVLSVAFV TGTLMFTSTI TTTFDRLFAT TASDVAVSAK VDKDAAPGSP EQTVSASVLD GVKALPGVQA VYGDITTDRL AVVGADNKAI SNSAGGPTIG ANWYATPHPA VNLTSGRPPA GPGDVVVDAD TAAKKHLALG SPLRVVTGTD AGTFQVTVSG IATFRTTNPG ETLFYFDTNT AQTKLLGKPG VFTGVDLDAK PGTADDTLKS EVSAKLGAGY DVKTRAEQEA DGRNSVGFIG FMKYVMLGFA GISLMVGAFL IVNTFQMLVA QRTRELGLLR ALGASRRQVN RSVRLEALLL GVIGASLGIA AGAGLAYGLI AVMNGVGMNL QASDMSVTPT AVIAGYAVGV LVTLLAVWIP ARRAARITPM AALRDAGTPG DRRSSWLRNG IGLAIIGGGA AALIGGAANG ASAAGGLLLG LGVLVTLIGA ILLGPLLAGV VIRVLGVWMP AAYGSVGTMA QRNALRNPRR TGATAAALMI GLSLVSGMAV VGSSLVTSAT AEMDRSVGAD YIITTNGGLV ITPEVLAKTE ATPGLAHVTE NKFLDATVSG SSGDGKMQIA AASPTMVQDF DATTTAGSLS EVFTKPGIAI PAAEAKSRNA SVGSVVTVTV HGGTPVKLPV LAILSDKTVF NHGDGYISLD TLSKSLPASA QPDDLMLFAK ADKGQQDKAY QALKDGLAPF PQVTVKSQTD YKKLIHDQVG GVLNMVYGLL GLAIVVAILG VVNTLALSVV ERTREIGLIR AIGMGRRKTR RMIRLESVVI ALFGAALGVG LGLAWGVAAQ RVLSGIGIST LAIPVGTIVA VFFGAAVVGL LAALAPAFRA SRMNVLRAIA ADG
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