Gene Caci_7898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7898 
Symbol 
ID8339274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9168318 
End bp9170879 
Gene Length2562 bp 
Protein Length853 aa 
Translation table11 
GC content71% 
IMG OID644960981 
Productprotein of unknown function DUF214 
Protein accessionYP_003118562 
Protein GI256396998 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGAAGG CATCCCGCCG CAATTTCTTC GCGCACAAGG GCCGGCTGTG GCTGTCCCTG 
GTCGCCGTCG TGCTGAGCGT GGCGTTCGTC ACCGGCACCC TGATGTTCAC CTCGACCATC
ACCACCACCT TCGACCGGCT GTTCGCCACC ACCGCCTCGG ACGTCGCGGT GTCGGCCAAG
GTCGACAAGG ACGCCGCGCC CGGCTCGCCG GAGCAGACCG TCTCGGCCTC CGTGCTGGAC
GGCGTCAAGG CACTGCCGGG CGTGCAGGCC GTCTACGGTG ACATCACCAC CGACCGCCTG
GCCGTGGTCG GCGCGGACAA CAAGGCCATC TCCAACTCCG CCGGCGGCCC GACCATCGGC
GCGAACTGGT ACGCCACGCC GCACCCGGCG GTGAATCTGA CCTCCGGCCG CCCGCCGGCC
GGACCCGGCG ACGTCGTCGT CGACGCGGAC ACCGCCGCCA AGAAGCACCT GGCGCTCGGC
TCGCCGCTGC GCGTCGTGAC CGGCACCGAC GCCGGCACCT TCCAGGTGAC CGTCAGCGGG
ATCGCGACCT TCCGGACCAC CAACCCCGGC GAGACGCTGT TCTACTTCGA CACCAACACC
GCGCAGACCA AGCTGCTGGG CAAGCCCGGC GTGTTCACCG GCGTGGACCT GGACGCCAAG
CCCGGCACCG CCGACGACAC GCTCAAGTCC GAGGTGTCCG CCAAGCTCGG CGCCGGCTAC
GACGTGAAGA CCCGGGCCGA GCAGGAGGCC GACGGCCGCA ACAGCGTGGG CTTCATCGGC
TTCATGAAGT ACGTGATGCT CGGCTTCGCC GGGATCTCGC TGATGGTCGG CGCGTTCCTG
ATCGTCAACA CCTTCCAGAT GCTCGTGGCG CAGCGCACCC GCGAACTGGG CCTGCTGCGG
GCGCTGGGCG CCAGCCGCCG GCAGGTCAAC CGCTCGGTCC GGCTCGAGGC GCTGCTGCTC
GGCGTCATCG GCGCCTCCCT GGGTATCGCC GCCGGCGCCG GCCTGGCCTA CGGCCTGATC
GCCGTCATGA ACGGCGTCGG GATGAACCTG CAGGCCTCCG ACATGTCGGT GACCCCGACC
GCGGTGATCG CCGGCTACGC GGTCGGCGTG CTGGTCACCC TGCTCGCGGT CTGGATCCCG
GCCCGCCGCG CGGCCCGCAT CACGCCGATG GCGGCGCTGC GCGACGCCGG GACGCCGGGG
GACCGCCGGT CCTCGTGGCT GCGCAACGGC ATCGGTCTGG CCATCATCGG CGGCGGCGCC
GCGGCGCTGA TCGGCGGCGC GGCCAACGGC GCCTCGGCAG CCGGGGGGCT GCTGCTGGGC
CTGGGCGTGC TGGTCACCCT GATCGGCGCG ATCCTGCTCG GCCCGCTGCT GGCCGGCGTG
GTGATCCGGG TGCTCGGCGT CTGGATGCCG GCGGCCTACG GCTCGGTCGG CACCATGGCG
CAACGCAACG CCCTGCGGAA CCCGCGCCGC ACCGGCGCCA CCGCCGCGGC CCTGATGATC
GGGCTGTCGC TGGTCTCCGG GATGGCCGTG GTCGGCTCCT CGCTGGTCAC CTCGGCGACC
GCCGAGATGG ACCGCAGCGT CGGCGCCGAC TACATCATCA CCACCAACGG CGGTCTGGTG
ATCACCCCCG AGGTGCTGGC CAAGACCGAG GCGACGCCGG GCCTGGCGCA CGTCACGGAG
AACAAGTTCC TGGACGCCAC GGTCTCCGGC TCCTCCGGCG ACGGCAAGAT GCAGATCGCG
GCGGCCTCGC CGACCATGGT CCAGGACTTC GACGCCACCA CCACCGCGGG CTCGCTGTCC
GAGGTGTTCA CCAAGCCGGG CATCGCGATC CCGGCAGCCG AGGCCAAGTC GCGCAACGCG
AGCGTCGGCT CGGTCGTGAC CGTCACCGTC CACGGCGGCA CGCCGGTCAA GCTGCCGGTG
CTGGCCATCC TGAGCGACAA GACAGTGTTC AACCACGGTG ACGGCTACAT CTCCCTGGAC
ACCCTGAGCA AGTCGCTGCC GGCTTCGGCG CAGCCCGACG ACCTGATGCT GTTCGCCAAG
GCCGACAAGG GCCAGCAGGA CAAGGCCTAC CAGGCGCTCA AGGACGGCCT GGCGCCCTTC
CCGCAGGTGA CGGTCAAGAG CCAGACCGAC TACAAGAAGC TGATCCACGA CCAGGTCGGC
GGCGTGCTGA ACATGGTCTA CGGGCTGCTG GGCCTGGCGA TCGTGGTGGC GATCCTGGGC
GTGGTCAACA CCCTGGCGCT GTCGGTGGTG GAGCGCACCC GCGAGATCGG CCTGATCCGG
GCGATCGGTA TGGGACGCCG CAAGACCCGC CGCATGATCC GCCTGGAGTC GGTGGTGATA
GCGCTGTTCG GCGCGGCTCT GGGTGTCGGG CTGGGTCTGG CCTGGGGAGT GGCCGCGCAG
CGGGTGCTGT CCGGGATCGG TATCAGCACC CTGGCCATCC CGGTGGGCAC CATCGTCGCG
GTCTTCTTCG GTGCCGCGGT GGTCGGCCTG CTGGCCGCGC TCGCGCCGGC CTTCCGGGCC
TCGCGGATGA ACGTGCTGCG GGCGATCGCG GCCGACGGCT GA
 
Protein sequence
MWKASRRNFF AHKGRLWLSL VAVVLSVAFV TGTLMFTSTI TTTFDRLFAT TASDVAVSAK 
VDKDAAPGSP EQTVSASVLD GVKALPGVQA VYGDITTDRL AVVGADNKAI SNSAGGPTIG
ANWYATPHPA VNLTSGRPPA GPGDVVVDAD TAAKKHLALG SPLRVVTGTD AGTFQVTVSG
IATFRTTNPG ETLFYFDTNT AQTKLLGKPG VFTGVDLDAK PGTADDTLKS EVSAKLGAGY
DVKTRAEQEA DGRNSVGFIG FMKYVMLGFA GISLMVGAFL IVNTFQMLVA QRTRELGLLR
ALGASRRQVN RSVRLEALLL GVIGASLGIA AGAGLAYGLI AVMNGVGMNL QASDMSVTPT
AVIAGYAVGV LVTLLAVWIP ARRAARITPM AALRDAGTPG DRRSSWLRNG IGLAIIGGGA
AALIGGAANG ASAAGGLLLG LGVLVTLIGA ILLGPLLAGV VIRVLGVWMP AAYGSVGTMA
QRNALRNPRR TGATAAALMI GLSLVSGMAV VGSSLVTSAT AEMDRSVGAD YIITTNGGLV
ITPEVLAKTE ATPGLAHVTE NKFLDATVSG SSGDGKMQIA AASPTMVQDF DATTTAGSLS
EVFTKPGIAI PAAEAKSRNA SVGSVVTVTV HGGTPVKLPV LAILSDKTVF NHGDGYISLD
TLSKSLPASA QPDDLMLFAK ADKGQQDKAY QALKDGLAPF PQVTVKSQTD YKKLIHDQVG
GVLNMVYGLL GLAIVVAILG VVNTLALSVV ERTREIGLIR AIGMGRRKTR RMIRLESVVI
ALFGAALGVG LGLAWGVAAQ RVLSGIGIST LAIPVGTIVA VFFGAAVVGL LAALAPAFRA
SRMNVLRAIA ADG