Gene Caci_7892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7892 
Symbol 
ID8339268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9157879 
End bp9159303 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content69% 
IMG OID644960975 
Producthypothetical protein 
Protein accessionYP_003118556 
Protein GI256396992 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGGCGG CCGAAGACGT GCTGCTCTTC GTGAACGCCG CGACCGCCTC GACCGGACAG 
CGGGAGTTCG CGCAGGACGC CGGGCAGCAG ACGATGTCGC TGTCGTTCCT GCACGAGTAC
ATGCGCGTCA ACTATCGCGA GCTGTATGCG GCGACCATGG CGCTCGGCAT CAACGACCAC
AACGCGGCGC TGGCGATACG TGGGCTGCTC GGCGACGCTA AGGACGTCCC CACGGAGCAG
AAGGCTATAG AGGGGCGCCT TATAGCGCGC ACACTCCTCA CGCTGCCTCC GCCGCGCGTA
TTCCGCCTCT TCAAGGCGTT GCGGCGCGAT GGCGTCAACA ACCGGCGGAC ACGCGCCATC
ATCCGCGACT GGATGACGAG CCTTGAGAAC CCGGCGTACC ACGCGGTGAA GTACCGCAGC
GGATTCAAGG CCGGACTCAA GCACGCGCAC GTCGACATCA GCGACAGCGA ACTGCGCGAC
TTCCTGTTCG GACCGCTTCA GCACAAGCCG TATGCCACGC CGATCCTGGA GACCTGGCGG
CAGGCGCACT ACGACGGCAA CGTCCTCTAT AAGCTCCCGT ACACCGTCGC CGAGGGCTTC
GCCGCCAAGC GCGGCGTCAA GCGCGAGGTC TTCCTGGAGC GCATCGGCAA GCAGATGACT
CCGCTGGAGA AGCTACGCAC CGACAGGGAG CCCGTCGATC CTCTCGCTCT GCTGAAAGGC
AGCGCCAAGT ACTGCGGCCC GCAGCAGATA CCGTGGCTGA CCCGGCTCGC GATCCGCATC
CTGGCGCTGC CCCTGGACGA GCGGGCCGCG CGGCGTGCCG AGCTCACCGA CGGCATGCGG
CACTTCGCGC GCGTCGAAGC CGGAGAGCTG GCCGGGACCT GGGGACGCGT CACGGCAGTG
CTCGACGACA GCTTCTCCTC CTTCGGCTCG CCGGTGAAGC GGCGGCGTCC GCTGGCCGTG
GCGTTGGCGA CGCACTTCCT GCTGGAAGCG TTGGCCGCGC CGGGCCAGTA CACACCGCTG
TGGATGTCCG GCCGCGACGA TCCTCTGCTG TCGTATCCGG GCGGCGCGAC GCCGCTGGGA
ACACGGCTGC TCGACGCGCT GGACACCTCG CCGGAGCGCG TCGTCGTGGT CTCCGACGGC
TGGGACAACA GCCCTCCCGG GCTGGCCGGG GAGGTGCTGC GGGTGTGGCG TACCCGGCTG
GACCCGGCGC GGCGTGTGGA CATCGTGCAC GTCAACCCGG TCTTCGACGC CGAAGGGCTG
GATGTGCGGG CCCTGAGCCC GCTGGTGCCC TCGGTCGGCA TCCGCGACGC CGAAGACCTG
GTGCTGCTGG TCGAGCTGGC GCAGTTCGCG CAGGGCCGGG TCGGGCTGCC GGAGCTGATG
GCGTATCTCG ACGGCCGGGT GCGGAGGTTC CTCGGTGCGG ATTGA
 
Protein sequence
MVAAEDVLLF VNAATASTGQ REFAQDAGQQ TMSLSFLHEY MRVNYRELYA ATMALGINDH 
NAALAIRGLL GDAKDVPTEQ KAIEGRLIAR TLLTLPPPRV FRLFKALRRD GVNNRRTRAI
IRDWMTSLEN PAYHAVKYRS GFKAGLKHAH VDISDSELRD FLFGPLQHKP YATPILETWR
QAHYDGNVLY KLPYTVAEGF AAKRGVKREV FLERIGKQMT PLEKLRTDRE PVDPLALLKG
SAKYCGPQQI PWLTRLAIRI LALPLDERAA RRAELTDGMR HFARVEAGEL AGTWGRVTAV
LDDSFSSFGS PVKRRRPLAV ALATHFLLEA LAAPGQYTPL WMSGRDDPLL SYPGGATPLG
TRLLDALDTS PERVVVVSDG WDNSPPGLAG EVLRVWRTRL DPARRVDIVH VNPVFDAEGL
DVRALSPLVP SVGIRDAEDL VLLVELAQFA QGRVGLPELM AYLDGRVRRF LGAD