Gene Caci_7875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7875 
Symbol 
ID8339251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9133157 
End bp9134476 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content70% 
IMG OID644960958 
Productprocessing peptidase 
Protein accessionYP_003118539 
Protein GI256396975 
COG category[R] General function prediction only 
COG ID[COG0612] Predicted Zn-dependent peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0597317 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACCCGG CTGAGACCCT GATCGCCGGG CAGAACGGCA GCGGCACTGT GCGCCGTACC 
GTTCTGCCCG GCGGTTTGCG CGTGGTCACC GAGACCATGC CCTCCGTTCG CTCCGTCACC
TTCGGCATCT GGACCGGCAT CGGCTCGCGC GACGAGCACG CCGAGGAGTC CGGTGCCACC
CACTATCTGG AGCACCTGCT CTTCAAGGGC ACCGCGAAGC GCTCGGCGCT GGAGATCTCC
GCGGCGCTGG ACGCGGTGGG CGGCGAGATG AACGCCTTCA CCGCCAAGGA GTACACGTGC
TACTACGCGC GCGTGCTCGA CACCGACCTG CCGCTGGCCA TCGACGTGAT CTGCGACCTG
GTCACCTCCG CGCTCATCCG CCCCGAGGAC GTCGCCTCCG AGCGCAACGT CATCCTCGAG
GAGATGGCGA TGACCGAGGA CGAGCCGGCC GACCAGATCC ACGACGAGTT CGCCTACGCC
CTGCTCGGCG ACTCCCCGCT CGGCCGGCCG ATCCTGGGCT CGGCGGAGTC GGTCAACGCC
CTGACCCGGG ACGCGATCGC CGAGTACTAC CACTCCCACT ACACCGACGA CCACCTGGTG
GTCTCCGCGG CCGGCAACCT CGACCACGAC GTGGTGGTGG CCCTGGTCGA CGCGGCGTTC
GCGCAGGCCC GCGGAGTCCG GGACGCCGAC CGCCAGCCGG TCGTCCCGCG CATCGGCGGC
GACTGCGGCG TCGCGCACTC CGGGCTCCGC CTGGTGTCCA AGCAGACCGA GCAGACGCAC
GTCGTGCTCG GCGTGCCGGG CGTCGCGCGC AACGACCGCC GCCGCTACCC GCTGGGCATC
CTGTCCACGA TCCTCGGCGG CGGCATGTCC TCGCGGCTGT TCCAGGAGGT CCGCGAGAAG
CGCGGCCTGG CGTACTCGGT CTACAGCTTC TCCTCGCACC ACGCCGACTG CGGCACGTTC
GGCGTCTACG CCGGCTGCCA GCCGGAGAAC TTCACCGAGG TGCTGAAGAT CTGCCGCGAC
GAGGTCGCCA AGATCGCCGA CGGCGGTGTC ACCGAGGAGG AGCTGCGCCG CGGCATCGGC
CAGGTGCGCG GCTCCACGGT GCTCTCCCTG GAGGACACCG GCTCGCAGAT GACGCGCATC
GGCAAGAACG AACTCGTCTA CGGCGAGCAC CTCACCATCG AAGAGCTGCT GGCGCGGGTG
GAGTCGGTGA CGCTCGAGGA CGTCAAGGCG GTCGCCGAGG AGTTCCTGCG GCAGCCCCAG
GCGATCGCGG TCATCGGCGA CTACGAGGAC GCTTCATCGT TCGAAGGAGC CCTGGCATGA
 
Protein sequence
MNPAETLIAG QNGSGTVRRT VLPGGLRVVT ETMPSVRSVT FGIWTGIGSR DEHAEESGAT 
HYLEHLLFKG TAKRSALEIS AALDAVGGEM NAFTAKEYTC YYARVLDTDL PLAIDVICDL
VTSALIRPED VASERNVILE EMAMTEDEPA DQIHDEFAYA LLGDSPLGRP ILGSAESVNA
LTRDAIAEYY HSHYTDDHLV VSAAGNLDHD VVVALVDAAF AQARGVRDAD RQPVVPRIGG
DCGVAHSGLR LVSKQTEQTH VVLGVPGVAR NDRRRYPLGI LSTILGGGMS SRLFQEVREK
RGLAYSVYSF SSHHADCGTF GVYAGCQPEN FTEVLKICRD EVAKIADGGV TEEELRRGIG
QVRGSTVLSL EDTGSQMTRI GKNELVYGEH LTIEELLARV ESVTLEDVKA VAEEFLRQPQ
AIAVIGDYED ASSFEGALA