| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7862 |
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| Symbol | |
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| ID | 8339238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 9120618 |
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| End bp | 9125300 |
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| Gene Length | 4683 bp |
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| Protein Length | 1560 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644960945 |
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| Product | putative sensor with HAMP domain |
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| Protein accession | YP_003118526 |
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| Protein GI | 256396962 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.712713 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGCGGGC CGCCGCCCGG CGGATCCATA TCCGACGCGG CCGCCGGCCG CACCGCGCCC
GGAGAGCTTC CGCGCGGGGT TCGGGATGGC GTGCTGCCCG GACAGCGTCC AGTCCCCACG
CCCCAGGAGA GCGAGGGCGG CGGCTCCCAC CTGCCTCCGC CCCCGCCGCC GACGGGGCAG
GCGAACCGCT TCGCCCCCCG CAACTGGCGC GTCCGGACCC GTCTGGTGGT CCTGGTCATC
GTGCCGTTGG TGGCGACGAT CTTCGGCGCC GCGGCCCGCA TCGTGCAGCA GGTCGGCAAC
GTGAAGACCT ACGACCACGC CACGACCATG GCCGCCGCGG CCAGCCCGCT GTCGACGCTG
ATCGACGCGC TGCAGGACGA GCGCGACATC AGCATCGAGA TGATGGCGTT CCGCGTGCAG
CAGAACACCG ACAACTCCAC GCTGACCAAC CTGACCACCT CGATGGCCAC GCAGCGCAAG
ATCACCGACC GCGCGACGGC CGAGATGCTG CCGGTGCTGA ACAAGATCGA CGGCTCCTAC
CCGGCGGACA CCCTGTCCGC GATCGCCAAC GCCAAGGCGA ACATGACCGG CATCGAGGCT
CTGCACACCG CGGTGGACGG CGCGTTCTCC TACCCGGTGA GCGTGTTCGA CCAGTACGAC
AAGGTGCTGG ACAGCCTGGA CAACCTCTAC GAGTTCGTCG CCGCCGACGC CGGGGACCAG
CAGCTGATCA ACGACGCCCG GTCGCTGGCG GACCTGGGCC GGATGACCGA GACGACCTCG
CGCGAGCGCG GATTCCTCAC CGTCCTGGCC GTCAGCTCCA ACCCCAACCA GTCCCAGGAC
AACCTGGCCA AGTTGCAGGG CCTGATCTCG GACCTGGCCT CCACCCGCAC CGAGTTCAAG
ACCATCGCCA CCACGCAGAT GCAGCAGACG CTGAGCGACA CCGTGGACGT CGGCGAGTCC
TACACCGGGG CGAACCAGTA CCTGCAGACG ATCGACGACA AGCTCGCCAA CGGCGGCGCC
AGCGATAACG GCGACCAGCT GGTCCCCGGC AGCGTCTACA CGCAGTACAA CTCGCTGCTC
GACCGGTACA AGAAGGTCCG CGCCCAGCAG GCGGCCGCGC TGGTCAAGCG AGCCGACTCG
CTGTCCAACA GCGCCCGCAA CACCATGTAC GTGAACATCG GCATCATCGT CGGCGTGCTG
CTGGTGGTGT CCGTGGCCAC CGCGCTGATC GCGCGATCCC TGGTGCGTCC GCTGCGAGTC
CTGCAGAACA CAGCCCTGGA GATCGCCGGC AACCGGCTGC CCGAGATGGT CCGCCGCCTG
CGCGACGCCG ACGGCAGCGA ACCGATCGAA CCGATCGCGC CGATCGCCTT GTCCAGCACC
GACGAGGTGG GCCAGGTGGC CCGCGCGTTC GACGAGGTGC ACCGCGAGGC GGTCCGGCTG
GCGACCGAGC AGGCCATGCT GCGGAACAAC GTCAACGCGA TGTTCACCAA CCTCTCGCGC
CGCTCGCAGT CGCTGGTCCA GCGCCAGCTG CGGCTGATCG ACGAGCTGGA GAACGCCGAG
CAGGACCCCG ACCAGCTCGC CTCGCTGTTC AAGCTGGACC ACCTCGCGAC CCGTATGCGC
CGCAACGGTG AGAACCTGCT GGTCCTCGCC GGTGAGGAGC CCGGGCGCCG CTGGTCCCAG
CCGGTCCCGC TGATCGACGT GTTGCGCGCC GCGGCCTCCG AGGTGGAGCA GTACGAGCGG
GTCACCCTGC GCGACCTGCC GACCGTCGAG GTCGCCGGCC GCGCCGTGAA CGACGTCGTC
CACCTGGTCG CCGAGCTGCT GGAGAACGCG ACCTCGTTCT CCGCCCCGGA GACCAAGGTC
TCGGTCACCG GCAACCTGCT GAACACCGGC GGCGTGATGC TGGAGATCGA GGACTCCGGG
ATCGGCATGA CCCCGGAGGA GCTGGACGAC TCCAACGAGC GCCTGGCCAA CCCGCCGGTC
GTGGACGTCG CCATCTCCCG CCGCATGGGC CTGTTCGTGG TCGGCCGGCT GGCCACCCGG
CACGGCATCC AGGTGCGGCT GCGCCGCTCG GCGACCGGCG GTATCACCGC GCTGGTGCTG
GTCCCGGCCG CGCTGCTGGC GGGCAACCTG TCCGACGCCC CGGCTGTGGG CGGCAACCGT
GCCGGCACCT TCGGCGACAT CGCCGACACC GGCCAGCTGC CCCAGCTGAC CTCCACCGGC
CTGCCGCGGC GGCCCGGCGG CGCGGTGCGC GCCGAGCAGC GCGAGCTGCC CTCGCCCGAG
GAGCCGCAGG GTCCGCCGAA CCAGGCGCCG GCCTCGCTGC CGCCGTTCGG CGGCGAGCGG
GTGCCGACGG CGAGCGCGAA CGACGGAGAC GGCTGGGAGG ACGTGAGCGC GGCGGCACCG
CCGTACCGCG GCACCGACGC CACCCCGCCG GGGCTGGCCG ACCTGCTGGC CGAGACCGAG
GCGATGTCGC AGGGCGTGAC CCCGATGATC CGCGAGGGCG ACCCGGGCGA TCCGGGGAGC
AGCGGCTCTC ACGTGCGTCC CGACTTCGTG CTGCCGGAAC CGGAACTCGA CGGCCGGCTG
GCCGAGGCCC TGGACGGGAC CGCGACGTAC GACTTCCGTC CGAACTCGGC ACCCGCGCCG
ACCCCGCCGA CCAACCCAGA GAACACCGGC CAGTTCCGCA TCAGCGCCGG CAGCGACGAC
ATGCGGCTGG ACTTCCGGGT CGGCGAACCC GGCCCGGCCA CGCCGCCCCC GCCGCCGCAG
GCACCGCCCA CTCGGCCGCC CCTGAACTTC TCCTCCAGCT TCGACGACCT GCTCCCGAAC
ATCCCGGACA TGGAGCACAC CGGAGAGTTC GCGGCCTACC GCGAAACACG GGACGAGCGC
GACGACCTGC TCCTGCCGCC GCCGAACCCG TACGCCGCGC CCGGCCAGAA CCCGCAGGCG
CCGTCCGCGG GCGGCTTCGG CAGCAACACC GAGCAGATGC CGGGCAGCGG TCTGAACAAC
GACCTCGGCG CCGAACTGGC CGCCGGCGAC CCGTTCGCCG CGCCCGGCGA GGTCCGCATG
ACGCCCTTCG GCGGACATGT GGACAGCGGC TTCGGCGACA GGGCTCAGAA CCCGCCGGCG
CAGAACCCCG CGGCTCCGGC GCCGTACGGC GGCGGGCAGC AGCCCGGCGA CACCTCCAAC
GGCCCGGCCT TCGAGGCTCC GCAGTTCGAG CCGCCGAGGT TCGAACCTCC GCAGTTCGAG
GCTCCGCAGT TCCAGCCGCC GCAGTTCGAA GCCCCGCAGT TCGAGGCTCC CCAGTTCGAA
GCGCCCCAGT TCGAGGCTCC GCAGTACGGC CAGAGCGCAC CGACTGGCGA CCCCATGGCG
TCGGGCGGGT TCGGCGCTCC GTCCGGAACC GGCTACGGCA ACGACGCGCC CTCCTTCGGG
CGCCGCCCGA TGGGCGAGCC GCTGTCCGGG CCCGGCTTCG ACGCACCGCA GTACGGCGAG
CAGCAAAGCG CCCCGATCGG TGACGGACCC GGCGACCCGA TGGCGGGCCT GCGGAATCCG
TTCACCGCGC CCGAGGCGCC GGCCGGCACC GGCTACGGCA ACGACGCCCC GTCCTTCGGG
CGCCGCCCGA TGGGCGAGCC GCTGTCCGGA CCGGGCTTCG ACGCGCCGCA GTACGGCGAG
CAGGCGCCCG CCGCCGACCT GTCCGGCTCC GGCTTCCAGA CCCCGGCCGC CGAACCGCGG
TACGGCACGC AGCCGCCGGC CGGCGACCCC TCCGGCTCCG GCTTCCACAC CCCGCTCGGC
GACACGATGG GCGGCGGGGG CTACCCGGCC CCGGCCGGCG AGCCGTTCGC CGCGCCGGAG
CAGATGTCCG CCTCCGGCAA CCACTTCACC GACTACACCG ACCCGCTCAC CGCCCCGATC
GAGTCCATCC CGATGGACCC GGCGGCGCAC ACCACCTCGA TCTTCAACGC GATCGAGTCC
GAGTGGTTCC GGGTGCGGGC CGGCGAAGGC ACCGCCGCTC CGCAGAACGC TCTGGAGGCC
GGCGCGGTGC GCCCGGCCGA ACCGGTCCGG CCGGCCGTGC CGGGACCGCG CTCAGAGCCC
GCAGGAGACC CGCTGGCGGG CTCCGGCACC GGTTACGCGG CCCAGGGTCC GCAGACGCCC
GCCGAGCCCG TCCAGCCCGT CCAGGCGGCC ACCACCGCGT CCACCCCGGC TCCGCCGACC
GCCCCCGAGG CCGGTCCGGC TGCCCCGACC CCGCCGGCCG CGCCGGCCGC CGACCCGTTC
GGCGCCCCGG CCCGGCCCGC CGCACCGCAC GAGGAACCCA AGGAGCCCAT GACCGACGAC
CAGAGCTCCG CGGGCCAGAC CTGGCACTCG CCGGGCGACG ACGGCTGGAA GGCCGCCGAG
GTGGTCAAGA AGCCGGTCGC GGCCGGCCTG ACCCCCAAGG GGCTGCCCAA GCGCGTCCCG
CGGTCCAACC TCGTGCCCGG CTCGGCGGAC GGCACCGGCG CCGCGAAGGT GGCGCCCTCG
CCGATCCCGG CGCGCTCGGC CGAGGCCGTG CGCTCCCGGC TGGCCAGCTT CCACAATGGG
CTGCGCCAGG GCCGCGACGC CGCCGGGACC CCCGGCGAGG CGCAGCCCTC CGATCCCGCC
AACCCCACCG CGTCCGACGG CCCGGCCGCC TTCGGTGCTC CTGAGCCAGG AAAGCAGGAC
TGA
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| Protein sequence | MGGPPPGGSI SDAAAGRTAP GELPRGVRDG VLPGQRPVPT PQESEGGGSH LPPPPPPTGQ
ANRFAPRNWR VRTRLVVLVI VPLVATIFGA AARIVQQVGN VKTYDHATTM AAAASPLSTL
IDALQDERDI SIEMMAFRVQ QNTDNSTLTN LTTSMATQRK ITDRATAEML PVLNKIDGSY
PADTLSAIAN AKANMTGIEA LHTAVDGAFS YPVSVFDQYD KVLDSLDNLY EFVAADAGDQ
QLINDARSLA DLGRMTETTS RERGFLTVLA VSSNPNQSQD NLAKLQGLIS DLASTRTEFK
TIATTQMQQT LSDTVDVGES YTGANQYLQT IDDKLANGGA SDNGDQLVPG SVYTQYNSLL
DRYKKVRAQQ AAALVKRADS LSNSARNTMY VNIGIIVGVL LVVSVATALI ARSLVRPLRV
LQNTALEIAG NRLPEMVRRL RDADGSEPIE PIAPIALSST DEVGQVARAF DEVHREAVRL
ATEQAMLRNN VNAMFTNLSR RSQSLVQRQL RLIDELENAE QDPDQLASLF KLDHLATRMR
RNGENLLVLA GEEPGRRWSQ PVPLIDVLRA AASEVEQYER VTLRDLPTVE VAGRAVNDVV
HLVAELLENA TSFSAPETKV SVTGNLLNTG GVMLEIEDSG IGMTPEELDD SNERLANPPV
VDVAISRRMG LFVVGRLATR HGIQVRLRRS ATGGITALVL VPAALLAGNL SDAPAVGGNR
AGTFGDIADT GQLPQLTSTG LPRRPGGAVR AEQRELPSPE EPQGPPNQAP ASLPPFGGER
VPTASANDGD GWEDVSAAAP PYRGTDATPP GLADLLAETE AMSQGVTPMI REGDPGDPGS
SGSHVRPDFV LPEPELDGRL AEALDGTATY DFRPNSAPAP TPPTNPENTG QFRISAGSDD
MRLDFRVGEP GPATPPPPPQ APPTRPPLNF SSSFDDLLPN IPDMEHTGEF AAYRETRDER
DDLLLPPPNP YAAPGQNPQA PSAGGFGSNT EQMPGSGLNN DLGAELAAGD PFAAPGEVRM
TPFGGHVDSG FGDRAQNPPA QNPAAPAPYG GGQQPGDTSN GPAFEAPQFE PPRFEPPQFE
APQFQPPQFE APQFEAPQFE APQFEAPQYG QSAPTGDPMA SGGFGAPSGT GYGNDAPSFG
RRPMGEPLSG PGFDAPQYGE QQSAPIGDGP GDPMAGLRNP FTAPEAPAGT GYGNDAPSFG
RRPMGEPLSG PGFDAPQYGE QAPAADLSGS GFQTPAAEPR YGTQPPAGDP SGSGFHTPLG
DTMGGGGYPA PAGEPFAAPE QMSASGNHFT DYTDPLTAPI ESIPMDPAAH TTSIFNAIES
EWFRVRAGEG TAAPQNALEA GAVRPAEPVR PAVPGPRSEP AGDPLAGSGT GYAAQGPQTP
AEPVQPVQAA TTASTPAPPT APEAGPAAPT PPAAPAADPF GAPARPAAPH EEPKEPMTDD
QSSAGQTWHS PGDDGWKAAE VVKKPVAAGL TPKGLPKRVP RSNLVPGSAD GTGAAKVAPS
PIPARSAEAV RSRLASFHNG LRQGRDAAGT PGEAQPSDPA NPTASDGPAA FGAPEPGKQD
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