Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7859 |
Symbol | |
ID | 8339235 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 9117155 |
End bp | 9118081 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644960942 |
Product | dihydrodipicolinate synthase |
Protein accession | YP_003118523 |
Protein GI | 256396959 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.31907 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.873958 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCAGA ACGCGCACCC CACCGAGCCC GCCGCCGACC TGTGGTCGGC CGGCGCGCCC TTCGGTCGCC TGATCACCGC GATGATCACG CCCTTCCAGG CGGACGGTTC CCTGGACCTG GACGGTGCGC AGAAACTGGC CGCGAATCTG GTCGACGCCG GCAACGACGG CCTGGTGGTC TCCGGGACCA CCGGCGAGTC GCCGACCACG ACGGACGCCG AGCAGAAGGC GCTGCTGCGC GCGGTGCGCG AAGCGGTCGG CGACCGGGCC CACGTGATCG CCGGCGTCGG CACCAACAGC ACCGCGCACA CGCTGGAGCT GGCCCGGCAG GCCGAGGAAG ACGCCGACGC GCTGCTGGTC GTGACCCCGT ACTACAACAA GCCCACGCAG GAGGGCCTGT ACCGGCACTT CACCGCTGTG GCCGACCACA CCTCGCGCCC GGTGGTGCTC TACGACATCC CGCACCGCTC CGGCATCCCG ATCGAGGTCG ACACGCTCAA GCGGCTCGCC GGCCACGACA TGATCGTCGC GGTCAAGGAC GCCAAGGGCG ACCTGACCGC GGGGTCCGAG GTGATGGCGG CCACCGGTCT GGCCTATTAT TCGGGGGACG ACCCGCTGAC CCTGCCCTGG CTCTCGGTCG GGGCGGTCGG CGTGGTGAGC ATGTCGGCCC ACCTCGCGGC GCCGCGCATC CGCGCGATGA TCGCCGCGTA TCTGGCCGGC GACGTGGCCG AGGCGGCCCG CCTGCACGCC GAACTGCTGC CGGTCCACGC CGGTGTGACG AGTCTGCCAG GTGTGATCTC CCTCAAGACG GCAATGAACA TGCTGGGACT GCCCGGCGGC CCGGTGCGGC TGCCCCTGGT CGAGGCGACC GAGGAGCAGC AGGCCCGGCT CAAGACGTTT CTCGCCCAAG GCGGCGTGAA GATCTAG
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Protein sequence | MPQNAHPTEP AADLWSAGAP FGRLITAMIT PFQADGSLDL DGAQKLAANL VDAGNDGLVV SGTTGESPTT TDAEQKALLR AVREAVGDRA HVIAGVGTNS TAHTLELARQ AEEDADALLV VTPYYNKPTQ EGLYRHFTAV ADHTSRPVVL YDIPHRSGIP IEVDTLKRLA GHDMIVAVKD AKGDLTAGSE VMAATGLAYY SGDDPLTLPW LSVGAVGVVS MSAHLAAPRI RAMIAAYLAG DVAEAARLHA ELLPVHAGVT SLPGVISLKT AMNMLGLPGG PVRLPLVEAT EEQQARLKTF LAQGGVKI
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