| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7849 |
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| Symbol | |
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| ID | 8339225 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 9106711 |
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| End bp | 9108168 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644960933 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_003118514 |
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| Protein GI | 256396950 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.444789 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCCGAGA GCACTCACCG CCGTCGCTAT CTCATTCTCG TGATCTGCTG CATGAGCCTG
TTCATCGTCG GCATCGACAA CACCGCGGTG AACGTGGCCC TGCCCTCGAT CCAGCGGGAT
CTGAACGCTC CCGTCTCCGG GCTCCAGTGG ACCATCGACG CCTACACCCT GACCCTGGCC
TCACTGCTGA TCCTGGCCGG CTCGCTCGGC GACCGGCTCG GCCGGCGCCG CGTGTTCATG
ACCGGTACCT CGCTGTTCGT CGTCGGCTCG GCGCTGTGCG CGCTGGCACC GAGCCTCGGG
GCGCTGGTCG GGGCACGTGC CCTGCAGGGC GTCGGCGGCG CCATGATGAA CCCGGTCGCG
ATGTCGATCA TCACCAACGT CTTCACCGAC AACAAGGACC GGGCCAAGGC GATAGGCATG
TGGTCGGCGG CGTTCGGGGT GAGCATGGCG GCCGGCCCGG TGGTCGGCGG CCTGCTGCTG
AGCGCCACCA GCTGGCGGTC CATCTTCTGG GTGAACGTGC CGGTCGGGCT GGCCGCCGTG
GTGCTGACCC GGGTCTTCGT GCCGGAGTCC AAGGCGCCGA CCGCCCGCCG CTTCGACCCG
GTCGGGCAGG TGCTCGGCAT CGCGTTCCTG GCCGGTGTCA CCTACGCGAT CATCGAGGCG
CCGCACGTCG GCTGGGTCTC GGCGCAGACC GTGGCGGTGT TCGTCGCGGC GATCGCGGCG
GCGGTCGGGT TCGTGGCCTA CGAACTGCGC CGCGAGCAGC CGCTGATCGA CCCGCGGTTT
TTCCGCAGCG TGCCGTTCTC CGGCGCCACG CTGATGGCGA TCTCCGGCTT CCTGGCGCTG
TCCGGCTTCC TGTTCATGAA CACCCTGTAT CTGCAGGACG CGCTCGGCTA CAGCGCGCTG
AAGGCGGGAC TGCTCACCCT GCCGATCGCC GTGGCCAGCG TCATCGTCGG TCCGCGCGCG
GGACGCTGGG TCGCCAACCA CGGCCCGCGC GCGCCGCTGA TCGCGGCCGG CGTGCTGCTG
GCGGTCAGCG CCCTACTGCT GACCGGGCTG AGCGCGACGA CGCCGGTGGC GCTGCTGCTG
GTCGCCTACG CGATCCTGGG CCTGGGCTTC GGCACCCTCA ACCCGCCGAT CACCAACACC
GCGGTGTCCG GCATGCCGCG GGCGCAGGCC GGCGTCGCGG CGGCGGTGGC CTCCACCAGC
CGGCAGGTCG GGCAGACGCT CGGCGTGGCG ATCATCGGCT CGGTGGTGGT GGCGCGGGCG
ACCGGCCCGG CGCGCACCGG CCTGCCGGCG GCCAGCCACG CGGGCTGGTG GATCCTGTTC
GGCTGCGGCC TCACAGTGTT CGTACTAGGT ATGCTCACGA CCGGTAAGCG CGCGGCGGCG
ACGGCCGCGA GCACCGCGGC CCGGCTGACC GAGCCGGCCG AGCCGACCAC CGAACCCGGG
ATTCCCGCAC TGCGATGA
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| Protein sequence | MPESTHRRRY LILVICCMSL FIVGIDNTAV NVALPSIQRD LNAPVSGLQW TIDAYTLTLA
SLLILAGSLG DRLGRRRVFM TGTSLFVVGS ALCALAPSLG ALVGARALQG VGGAMMNPVA
MSIITNVFTD NKDRAKAIGM WSAAFGVSMA AGPVVGGLLL SATSWRSIFW VNVPVGLAAV
VLTRVFVPES KAPTARRFDP VGQVLGIAFL AGVTYAIIEA PHVGWVSAQT VAVFVAAIAA
AVGFVAYELR REQPLIDPRF FRSVPFSGAT LMAISGFLAL SGFLFMNTLY LQDALGYSAL
KAGLLTLPIA VASVIVGPRA GRWVANHGPR APLIAAGVLL AVSALLLTGL SATTPVALLL
VAYAILGLGF GTLNPPITNT AVSGMPRAQA GVAAAVASTS RQVGQTLGVA IIGSVVVARA
TGPARTGLPA ASHAGWWILF GCGLTVFVLG MLTTGKRAAA TAASTAARLT EPAEPTTEPG
IPALR
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