Gene Caci_7849 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7849 
Symbol 
ID8339225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9106711 
End bp9108168 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content72% 
IMG OID644960933 
Productdrug resistance transporter, EmrB/QacA subfamily 
Protein accessionYP_003118514 
Protein GI256396950 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.444789 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGAGA GCACTCACCG CCGTCGCTAT CTCATTCTCG TGATCTGCTG CATGAGCCTG 
TTCATCGTCG GCATCGACAA CACCGCGGTG AACGTGGCCC TGCCCTCGAT CCAGCGGGAT
CTGAACGCTC CCGTCTCCGG GCTCCAGTGG ACCATCGACG CCTACACCCT GACCCTGGCC
TCACTGCTGA TCCTGGCCGG CTCGCTCGGC GACCGGCTCG GCCGGCGCCG CGTGTTCATG
ACCGGTACCT CGCTGTTCGT CGTCGGCTCG GCGCTGTGCG CGCTGGCACC GAGCCTCGGG
GCGCTGGTCG GGGCACGTGC CCTGCAGGGC GTCGGCGGCG CCATGATGAA CCCGGTCGCG
ATGTCGATCA TCACCAACGT CTTCACCGAC AACAAGGACC GGGCCAAGGC GATAGGCATG
TGGTCGGCGG CGTTCGGGGT GAGCATGGCG GCCGGCCCGG TGGTCGGCGG CCTGCTGCTG
AGCGCCACCA GCTGGCGGTC CATCTTCTGG GTGAACGTGC CGGTCGGGCT GGCCGCCGTG
GTGCTGACCC GGGTCTTCGT GCCGGAGTCC AAGGCGCCGA CCGCCCGCCG CTTCGACCCG
GTCGGGCAGG TGCTCGGCAT CGCGTTCCTG GCCGGTGTCA CCTACGCGAT CATCGAGGCG
CCGCACGTCG GCTGGGTCTC GGCGCAGACC GTGGCGGTGT TCGTCGCGGC GATCGCGGCG
GCGGTCGGGT TCGTGGCCTA CGAACTGCGC CGCGAGCAGC CGCTGATCGA CCCGCGGTTT
TTCCGCAGCG TGCCGTTCTC CGGCGCCACG CTGATGGCGA TCTCCGGCTT CCTGGCGCTG
TCCGGCTTCC TGTTCATGAA CACCCTGTAT CTGCAGGACG CGCTCGGCTA CAGCGCGCTG
AAGGCGGGAC TGCTCACCCT GCCGATCGCC GTGGCCAGCG TCATCGTCGG TCCGCGCGCG
GGACGCTGGG TCGCCAACCA CGGCCCGCGC GCGCCGCTGA TCGCGGCCGG CGTGCTGCTG
GCGGTCAGCG CCCTACTGCT GACCGGGCTG AGCGCGACGA CGCCGGTGGC GCTGCTGCTG
GTCGCCTACG CGATCCTGGG CCTGGGCTTC GGCACCCTCA ACCCGCCGAT CACCAACACC
GCGGTGTCCG GCATGCCGCG GGCGCAGGCC GGCGTCGCGG CGGCGGTGGC CTCCACCAGC
CGGCAGGTCG GGCAGACGCT CGGCGTGGCG ATCATCGGCT CGGTGGTGGT GGCGCGGGCG
ACCGGCCCGG CGCGCACCGG CCTGCCGGCG GCCAGCCACG CGGGCTGGTG GATCCTGTTC
GGCTGCGGCC TCACAGTGTT CGTACTAGGT ATGCTCACGA CCGGTAAGCG CGCGGCGGCG
ACGGCCGCGA GCACCGCGGC CCGGCTGACC GAGCCGGCCG AGCCGACCAC CGAACCCGGG
ATTCCCGCAC TGCGATGA
 
Protein sequence
MPESTHRRRY LILVICCMSL FIVGIDNTAV NVALPSIQRD LNAPVSGLQW TIDAYTLTLA 
SLLILAGSLG DRLGRRRVFM TGTSLFVVGS ALCALAPSLG ALVGARALQG VGGAMMNPVA
MSIITNVFTD NKDRAKAIGM WSAAFGVSMA AGPVVGGLLL SATSWRSIFW VNVPVGLAAV
VLTRVFVPES KAPTARRFDP VGQVLGIAFL AGVTYAIIEA PHVGWVSAQT VAVFVAAIAA
AVGFVAYELR REQPLIDPRF FRSVPFSGAT LMAISGFLAL SGFLFMNTLY LQDALGYSAL
KAGLLTLPIA VASVIVGPRA GRWVANHGPR APLIAAGVLL AVSALLLTGL SATTPVALLL
VAYAILGLGF GTLNPPITNT AVSGMPRAQA GVAAAVASTS RQVGQTLGVA IIGSVVVARA
TGPARTGLPA ASHAGWWILF GCGLTVFVLG MLTTGKRAAA TAASTAARLT EPAEPTTEPG
IPALR