| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7839 |
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| Symbol | |
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| ID | 8339215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 9097136 |
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| End bp | 9098653 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644960923 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_003118504 |
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| Protein GI | 256396940 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0757914 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATCGC CGTCGGAGAG CGCGACGACC CCGTCCGAGG CCGCGAAGAG TGCCGCCGAG
GACGCCACGT ACGGACCGCG GGTCGCCCAT GAATGGATGA TCCTCGGTGT CGTGAGCCTC
GCGCAGCTGA TGGTGGTGCT GGACGCGACC GTGGTGACCA TCGCGCTGCC CTCCGCGCAG
CAGGATCTGG GGTTCACCAA TGCCTCGCGG CAGTGGATCG TCACCGCGTA TGCGCTGGCG
TTCGGCTCGC TGTTGCTGGT CGGGGGGCGG TTCGCGGACC TGTTCGGGCG GCGGAACGCG
CTGATCGGCG GGTTGGTCGG GTTCGGGGTA GCCTCGGCGC TGGCCGGGAT CGCGCCCAAC
GTGGGCATCC TGATCGGCGG TCGTGCGCTG CAGGGCCTGT TCGGCGCGTT GCTGGCGCCG
GCGGCGCTGA GTGCCTTGAC CACCACCTTC ACCCGACCGG CGGAGCGGAA CCGGGCGTTC
GCCGTGTACG GCGCGGTAGC CGGCGCGGGC GGCGCGATCG GGCTGTTGCT CGGCGGGCTG
CTGACCGAGT ATCTGAACTG GCGCTGGACG CTGTTCGTCA ACCTGGTCAT CGCCGGGGTC
GCGCTGCTCG GCGCACTGGC CTATGTCCCG AACCACCGGC CCGAGGGCCG TCCGACGCTG
GACCTGCCTG GCACTGCCTA CGCCTGTTCC GGATTGTTCC TGCTGGTCTT CGGCTTCTCG
CGAGCTGAAG CGAAGGGCTG GAGCTCGCCG CAGTCCTGGG TCAGCCTGAT CGTCGGCTGC
GTCCTGCTCG TCCTCTTCGC CCGGTGGCAG CGCCGCGCTC CGCACCCGCT GTTGCCGCTG
CGGGTGGTGG CGGAGCGCAA CCGGGGCTCG TCCTACCTGG GAATGTTCAT CACCGGCGCC
GGGATCTTCG GCGTCTTCCT GTTCCTGACG TACTACATGC AGCAGATCCT CGGCTATTCG
CCGGTCAAGA CCGGTCTGGC CTTCCTGCCG ATGGTCGGCG CGCTGATGGT GTCCGCGCAG
ATCGCGACGA TCACCCTGCT GCCCAGAGTG GGTCCCCGGC CGGTGGTTCC GCTGGGCATG
CTGTTCGGCG GGGTCGGCAT GTTGTGGCTG ACCCGGCTCG AGCTGACCAG CAGCTACGCC
CCGCACATCC TGCCGCCGCT GCTGGTCCTC GGTTTCGGGA TGGGGTTGAT CTTCGCCCCG
GCGATGGCCA TGGCCACCTA CGGGGTACGC GCCGACGACG CGGGCGTCGC CTCGGCGATG
GTCAACACCT GTCAGCAGGT CGGCGGCTCC ATAGGCGTGG CACTGCTTTC CACGTTGGCC
GCCAGCGCGG CGACGAACTA TGCCAAGGGC AAGACCGCCT CGTCGCTGGT GACCGCACAG
GCCAACCTGC ACAGCTACGC CACGGCCTAC CGCTGGTCCG CCGCGTTCTT CTTCGTCGGC
ATGGTCATCT GCTTCCTGCT CTATCGCTGG GGCGCGCCGA AGGGCGATCC AGAAGCGCAG
GGCCCAGTCC CGATGTAG
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| Protein sequence | MASPSESATT PSEAAKSAAE DATYGPRVAH EWMILGVVSL AQLMVVLDAT VVTIALPSAQ
QDLGFTNASR QWIVTAYALA FGSLLLVGGR FADLFGRRNA LIGGLVGFGV ASALAGIAPN
VGILIGGRAL QGLFGALLAP AALSALTTTF TRPAERNRAF AVYGAVAGAG GAIGLLLGGL
LTEYLNWRWT LFVNLVIAGV ALLGALAYVP NHRPEGRPTL DLPGTAYACS GLFLLVFGFS
RAEAKGWSSP QSWVSLIVGC VLLVLFARWQ RRAPHPLLPL RVVAERNRGS SYLGMFITGA
GIFGVFLFLT YYMQQILGYS PVKTGLAFLP MVGALMVSAQ IATITLLPRV GPRPVVPLGM
LFGGVGMLWL TRLELTSSYA PHILPPLLVL GFGMGLIFAP AMAMATYGVR ADDAGVASAM
VNTCQQVGGS IGVALLSTLA ASAATNYAKG KTASSLVTAQ ANLHSYATAY RWSAAFFFVG
MVICFLLYRW GAPKGDPEAQ GPVPM
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