| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7827 |
|---|
| Symbol | |
|---|
| ID | 8339203 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 9080553 |
|---|
| End bp | 9081278 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644960911 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003118492 |
|---|
| Protein GI | 256396928 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGTCC AGCTTGTCGC CCTCTGCATC GACGCGCACG ACCCGCTCCG GCTCGCCCGC
TTCTGGGCCG GGGTCTTGGG CTGGGAACAG GCCGATGACC CCGAAGGCAT CGCGCTGAAC
CCCAACGACG ACACGGGATT CCGGCTGCGC TTCCTGCCGT CAGAGGCGGA GAAGGTCCAG
CAGAACCAGA TGCACTTCGA CCTGACGAGC GCGTCCCCGG AGATGCAGCG GCAGACCGTC
GCTCGGGCGC TGGAACTCGG CGGTCGGCAC CACGACGTGG GTCAGGGCCC GGATGCGACG
CATGTGGTGC TCGCCGATCC GGAGGGCAAC GAGTTCTGCG TGATCGCGGC GGGCAACAAG
TTCCTCGCCG AATGCGGCTT CGTCGGAGCG CTGGCGAGCG ACGGTTCGCA GGAGGTGGGC
TACTTCTGGA GCCGAGTGCT GGACTGGCCT CTGGTCTGGG ACCAGGACCA GGAGACCGCG
ATCCGGTCCC CGCACGGCGG TCCGAAGATC ACCTGGGGCG GTCCGCCGTT CGCCGCGAAG
CCCGGACGAA ACCGGCTGCG CTTCGACCTC GCCGTCGTCG GCGATCGCCA AGCCGGCAGC
GGATTGAATA CGGAGCTTGA CCGCCTGGTG TCGCTCGGCG CCGCCCGCAC CGGCGCCGCT
CCCGGTCCGC TCGGCGAGGT GGAGATGACC GACCCCGACG GCAACGAGTT CACCGTGTGG
CCCTGA
|
|---|
| Protein sequence | MAVQLVALCI DAHDPLRLAR FWAGVLGWEQ ADDPEGIALN PNDDTGFRLR FLPSEAEKVQ
QNQMHFDLTS ASPEMQRQTV ARALELGGRH HDVGQGPDAT HVVLADPEGN EFCVIAAGNK
FLAECGFVGA LASDGSQEVG YFWSRVLDWP LVWDQDQETA IRSPHGGPKI TWGGPPFAAK
PGRNRLRFDL AVVGDRQAGS GLNTELDRLV SLGAARTGAA PGPLGEVEMT DPDGNEFTVW
P
|
|---|
| |