Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7824 |
Symbol | |
ID | 8339200 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 9076889 |
End bp | 9077839 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644960908 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_003118489 |
Protein GI | 256396925 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02957] RNA polymerase sigma-70 factor, TIGR02957 family |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAGCAGG ACCTTCCTAC GTGGGACGAC GCCGAAGCCG CCGAGGCCTT CAACGACCAC CGCAGGCTGC TGACGTCCGT GGCCTACCGC GTGCTCGGCC GCTGGAGCGA CGCCGAGGAC GTCGTGCAGG ACGCGTGGCT GCGCTGGAGC GCCGCCGACT ACGCCTCGGT CGAGGACCCG AAGGCCTTCC TGGTCACCGT GACGACCCGG CTGGCCATCG ACCAGCTCCG CAAGGCGCAG ACCCGCAAGG AGTCCTACGT CGGGCCCTGG CTCCCGGAGC CGGTGCTGAC CCGGGACGGC GCCGACAGCG CCCCGGACGC CGCCGACCGC GTGGTCCTGG ACGACACCGT CTCGCTGGCC ATGCTGCTGG TGATGGAGAC GCTCTCGCCG CTGGAGCGCG CCGTGTTCGT GCTGCGCGAG GCCTTCGACT ACAGCTTCGC CGAGATCGCC GCGATGCTGG ACCGCACCGA GGCCGCGGTG CGCCAGCTGC TGGTCCGGGC CCGCGCCCAC GTCCACGACA AGCGCCCGCG CTACCCGCTG GACGACGTGA AGCGGCACGG CATCGCCGAG CGCTTCCTGG CGGCGTGCGT CGGCGGCGAC GTCGCGCCGC TGCTGGAGTT GCTGTCCCCG GAGGTCACGG TCATCTCCGA CGGCGGCGGC GTGGTCACCG CGGCGACGCG TCCGGTGGTC GGCCTGGACC ACGTGGCCCG GTTCCTGATG GGCATCGCCA CGAAGTACGC GAAGTACATC GAAGACGGCG TGAACATCCG TATCGAGATC TCGCCGGCCG GAGTCAACGG CGATCCGGCG ATCATCGCGT TCGCCGACGA CAAGGTGCTC TACGTCTACT CGCTGGACCT GGCCGAGGAC GGCAGGATCC GCACGGTCTT CGCCATGGCC AACCCCGAGA AGCTCAGCGG GGTGCGCGAG CTGGAGGGTG ACGCGGGCTG A
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Protein sequence | MEQDLPTWDD AEAAEAFNDH RRLLTSVAYR VLGRWSDAED VVQDAWLRWS AADYASVEDP KAFLVTVTTR LAIDQLRKAQ TRKESYVGPW LPEPVLTRDG ADSAPDAADR VVLDDTVSLA MLLVMETLSP LERAVFVLRE AFDYSFAEIA AMLDRTEAAV RQLLVRARAH VHDKRPRYPL DDVKRHGIAE RFLAACVGGD VAPLLELLSP EVTVISDGGG VVTAATRPVV GLDHVARFLM GIATKYAKYI EDGVNIRIEI SPAGVNGDPA IIAFADDKVL YVYSLDLAED GRIRTVFAMA NPEKLSGVRE LEGDAG
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