| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7811 |
|---|
| Symbol | |
|---|
| ID | 8339187 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 9062977 |
|---|
| End bp | 9063852 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644960895 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_003118476 |
|---|
| Protein GI | 256396912 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4585] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGTGGG TGCTGGTGGG GGCGCTGCTC GTGGCAGGCG CGGCGGGCGC GGCCGCGAGC
CGGCTAGCGG TGCTCCTCCG CCGCGAACGC GGGAGGTACA CCCGCGCCAT CGAGGAGCGC
GGCTGGCTGC TGGAACGCGA GCGGGAGAGC GCCGCGCAGC AGGCCGTGGA CCTCGAGCGG
TCACGGATCG CCCGGGAGCT GCACGACATC GTCAGCCACA ACGTGAGCAT GATGCTGATT
CAGGCCGGCG CGGCCCGGCA GGTGCTGGCA GCCGCCCCGG CGCAGAGCGC GACCGCCGAG
GAACCGGCTG CGTCCGGAGT CGCCGAAGAC GCGCTGCTGG CCGTGGAGAG CGCGGGTCGC
GCGACCATGA CCGAGCTGCG GCACCTGCTC GGCGTCCTGG CTCCGGCGGC GGACGGCCGC
GACCAGCCCG GCGCCGGCGC CGATCCCGCC CTGGCGCCGC AGCCGACCCT GTCCCGGCTC
TCAGCACTCG TCGACAAGAT CGCCTTCGCC GGGCTGCCGG TGGACGCCCG CATCTCCGGC
GAGCCGCGTC CGCTGCCCGG CGGCATCGAC TCGACCGCGT ACCGGATCGT GCAGGAAGCC
CTGACCAACG CCCTCAAGCA CGGCGGCCGC GACGCCGCGC TGACCATCCG CTACGACGAC
CGCTACCTGC GCATCGAGAT CCTCACCGCG GGCCACGGCT CGCTGGACGA GGTCGGCACC
GAACCCGCAC CTCGCGGCGG CGAGAGGATC GGTACCGGCC GCGGCCTGAC GGGCTTGAAG
GAACGCGTCG CGGTCTACGG CGGCGACCTC GACGCCCGGC GGCGCCTCGG CGGTGGTTTC
CGGGTCCGCG CGAAGATACC TTTGGACGAA CCATGA
|
|---|
| Protein sequence | MLWVLVGALL VAGAAGAAAS RLAVLLRRER GRYTRAIEER GWLLERERES AAQQAVDLER
SRIARELHDI VSHNVSMMLI QAGAARQVLA AAPAQSATAE EPAASGVAED ALLAVESAGR
ATMTELRHLL GVLAPAADGR DQPGAGADPA LAPQPTLSRL SALVDKIAFA GLPVDARISG
EPRPLPGGID STAYRIVQEA LTNALKHGGR DAALTIRYDD RYLRIEILTA GHGSLDEVGT
EPAPRGGERI GTGRGLTGLK ERVAVYGGDL DARRRLGGGF RVRAKIPLDE P
|
|---|
| |