Gene Caci_7799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7799 
Symbol 
ID8339175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9042415 
End bp9044778 
Gene Length2364 bp 
Protein Length787 aa 
Translation table11 
GC content74% 
IMG OID644960883 
ProductUvrD/REP helicase 
Protein accessionYP_003118464 
Protein GI256396900 
COG category[L] Replication, recombination and repair 
COG ID[COG0210] Superfamily I DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTGA CTCATCCCGG TTCCGGCCCG GTTCCCGCCG CCGCGCTGCT GGACGCGCTC 
GACCCCGAGC AGCGGGCGGT GGCCGAGGCG CTGCACGGGC CGGTGTGCGT GCTCGCCGGC
GCCGGGACCG GCAAGACGCG GGCCATCACC TACCGCATCG CCTACGGCGT GGCGACCGGC
GAGTACATCC CGAGCCAGGT GCTGGCCGTC ACCTTCACCC AGCGGGCGGC CGGGGAGATG
CGGGGGCGGC TGCGGCAGCT GGGTTCCGGC GGCGTGCAGG CGCGGACGTT CCACGCCGCG
GCGCTGCGGC AGCTGCAGTA CTTCTGGCCC AAGGCGGTCG GCGGCCCGAA CCCGCAGCTC
GTCGACTCCA AGATCCCGCT GGTCTCCGAG GCGGTCCGGC GGCTGCGGCT GCACGCCGAG
CGGGCCGAGC TGCGCGACCT GGCCGGCGAG ATCGAGTGGG CCAAGTCGAC CCAGGTGGTG
GCCGACGACT ACGCCGCGGC CGCCGCCAAG GCGCAGCGCA CGCCGCCGCG CGACGCCGCC
GAGGTGGCGA AGGTCTACGC CGAGTACGAG AGCGCCAAGC GGGACCGCAA CGCCATCGAC
TTCGAGGACG TCCTCCTGCT CACCATCGGC ATCATGGAGG AGCGCCCGGA CATCGCCGCG
ACGGTGCGCA ACCAGTACCG CTACTTCACC GTCGACGAGT ACCAGGACGT CAACCCCCTG
CAACAGCGCC TGCTGGACTG CTGGCTGGGG GAGCGGGGCG ACGTGTGCGT GGTCGGCGAC
GCCAGCCAGA CCATCTACTC CTTCACCGGC GCCGACCCGC GCTACCTGCT GGACTTCGCC
GACCGCTTCG ACGACCCGAC CGTGGTCAAG CTGGTCCGCG ACTACCGCTC CACGCCGCAG
GTCGTCGCGC TGGCCAACGC TCTGCTGGAC CGCGCCGAGG GCCGCGCCGC CAAGGCCCGG
GTCCAGCTGA TCGCGCAGCG CGCCGACGGT CCGCGCCCGA AGTTCGCCGA GCACCCCGAC
GCCGAGACCG AGGCCCGCGA GGTCGCCCGG GAGATCAAGA AGCTGGTGGA CGCGGGCGTC
CGGCTCTCCG AGGTCGCCGT GCTCTACCGC ATCAACGCGC AGTCCGAGGA GTACGAGCAG
GCGTTCAGCG ACGCCGGCGT GCCCTACATA CTGCGCGGCG TCGAGCGCTT CTTCGAGCGC
CCCGAAGTCC GCGAGGCGAT CCAGGTCTGG CTGCGCGGCG CCGCCAAGGC CCGCTCCGAC
CACGCCTCCG ACGCCCTCCC CGGCCTCGGC GGCGGCCCGG CCGAAGACGG CGAGGGCGGG
AGCCTGGCCA CGGAGGTCCG CGCGATCTTC GCCAGCCACG GCTGGACCCC GCTCGCGCCC
AAGGGCGCCG GGCGCCTGCG CGACCGCTGG GAGTCGCTGG CCGCGCTGGT CTCCCTGGCC
GAGGAGTACG GCCGCACGCA CCCGGACGCC GGGCTCGACC GGTTCAGCGC CGAGCTGCGC
GAGCGCGCCG ACGCCCAGCA CGCGCCGACC GTCGAGGGCG TCACGCTGTC CACCTTCCAC
GCCGCCAAGG GCTTGGAGTG GGACGCGGTC TTCCTGGTCG GCATGACCGA GGGCATGATG
CCGATCACCT ACGCCGAGAC CCCCGAGCAG GTGGAGGAGG AGCGGCGGCT TCTCTATGTC
GGGGTCACCC GCGCTCGCGA GCGGCTGTTC CTGTCGTGGG CGCTGGCGCG CTCCCCGGGC
GGCCGGGCTT CGCGTTCCCC GTCGCGGTTC CTGGACGGGC TGCGCGGCGG CGTCGGCCGC
GACACCCGCG AGGGCGCGGC GGGCGGCGTC ATAAGAGGCG GTGGCTCCGG ACGGCGCCGC
GTCCCCACCT CGTCCGGCGA CAGCGAGGAA CGCCCGCGCC GCACGGTCGA GCCGATCACC
TGCCGGGTCT GCCACCGGGC TCTGATCGAC GCCGCCGAGC GCAAGATCGG CCGCTGCGAG
GGCTGCCCGA GCACCCTGGA CCCCGAGCTG TACGAGGCGC TGCGCGAATG GCGCTCGGAC
CAGGCGAAGA AGCAGAAGCT GCCGGTGTTC GCGGTCTTCA CCGACGCCAC GCTGATCGCG
ATCGGCGAGT CGCGGCCCGC CACGCTCGCC GCCCTGATCA AGATCGCCGG GGTCGGCAAG
GCGAAGGGGG ACCGCTACGG GGACGAGGTG CTGGGGCTCA TCGCGAGTTC CGAGTCCGGG
ACGGCCCAGA GCTCGGCCCG GACCTCTGCT CAGACGTCTG CTCAGAGCTC TGGTTCAGCT
CCCAAGCCGC GCACGGCTCA GACGTCCGAG ACGGCTTCCG AGCCCGACCC CGCTCACAAG
TCAGGGCAGG CCGCGGCGAG CTGA
 
Protein sequence
MPLTHPGSGP VPAAALLDAL DPEQRAVAEA LHGPVCVLAG AGTGKTRAIT YRIAYGVATG 
EYIPSQVLAV TFTQRAAGEM RGRLRQLGSG GVQARTFHAA ALRQLQYFWP KAVGGPNPQL
VDSKIPLVSE AVRRLRLHAE RAELRDLAGE IEWAKSTQVV ADDYAAAAAK AQRTPPRDAA
EVAKVYAEYE SAKRDRNAID FEDVLLLTIG IMEERPDIAA TVRNQYRYFT VDEYQDVNPL
QQRLLDCWLG ERGDVCVVGD ASQTIYSFTG ADPRYLLDFA DRFDDPTVVK LVRDYRSTPQ
VVALANALLD RAEGRAAKAR VQLIAQRADG PRPKFAEHPD AETEAREVAR EIKKLVDAGV
RLSEVAVLYR INAQSEEYEQ AFSDAGVPYI LRGVERFFER PEVREAIQVW LRGAAKARSD
HASDALPGLG GGPAEDGEGG SLATEVRAIF ASHGWTPLAP KGAGRLRDRW ESLAALVSLA
EEYGRTHPDA GLDRFSAELR ERADAQHAPT VEGVTLSTFH AAKGLEWDAV FLVGMTEGMM
PITYAETPEQ VEEERRLLYV GVTRARERLF LSWALARSPG GRASRSPSRF LDGLRGGVGR
DTREGAAGGV IRGGGSGRRR VPTSSGDSEE RPRRTVEPIT CRVCHRALID AAERKIGRCE
GCPSTLDPEL YEALREWRSD QAKKQKLPVF AVFTDATLIA IGESRPATLA ALIKIAGVGK
AKGDRYGDEV LGLIASSESG TAQSSARTSA QTSAQSSGSA PKPRTAQTSE TASEPDPAHK
SGQAAAS