Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7799 |
Symbol | |
ID | 8339175 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 9042415 |
End bp | 9044778 |
Gene Length | 2364 bp |
Protein Length | 787 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644960883 |
Product | UvrD/REP helicase |
Protein accession | YP_003118464 |
Protein GI | 256396900 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCTGA CTCATCCCGG TTCCGGCCCG GTTCCCGCCG CCGCGCTGCT GGACGCGCTC GACCCCGAGC AGCGGGCGGT GGCCGAGGCG CTGCACGGGC CGGTGTGCGT GCTCGCCGGC GCCGGGACCG GCAAGACGCG GGCCATCACC TACCGCATCG CCTACGGCGT GGCGACCGGC GAGTACATCC CGAGCCAGGT GCTGGCCGTC ACCTTCACCC AGCGGGCGGC CGGGGAGATG CGGGGGCGGC TGCGGCAGCT GGGTTCCGGC GGCGTGCAGG CGCGGACGTT CCACGCCGCG GCGCTGCGGC AGCTGCAGTA CTTCTGGCCC AAGGCGGTCG GCGGCCCGAA CCCGCAGCTC GTCGACTCCA AGATCCCGCT GGTCTCCGAG GCGGTCCGGC GGCTGCGGCT GCACGCCGAG CGGGCCGAGC TGCGCGACCT GGCCGGCGAG ATCGAGTGGG CCAAGTCGAC CCAGGTGGTG GCCGACGACT ACGCCGCGGC CGCCGCCAAG GCGCAGCGCA CGCCGCCGCG CGACGCCGCC GAGGTGGCGA AGGTCTACGC CGAGTACGAG AGCGCCAAGC GGGACCGCAA CGCCATCGAC TTCGAGGACG TCCTCCTGCT CACCATCGGC ATCATGGAGG AGCGCCCGGA CATCGCCGCG ACGGTGCGCA ACCAGTACCG CTACTTCACC GTCGACGAGT ACCAGGACGT CAACCCCCTG CAACAGCGCC TGCTGGACTG CTGGCTGGGG GAGCGGGGCG ACGTGTGCGT GGTCGGCGAC GCCAGCCAGA CCATCTACTC CTTCACCGGC GCCGACCCGC GCTACCTGCT GGACTTCGCC GACCGCTTCG ACGACCCGAC CGTGGTCAAG CTGGTCCGCG ACTACCGCTC CACGCCGCAG GTCGTCGCGC TGGCCAACGC TCTGCTGGAC CGCGCCGAGG GCCGCGCCGC CAAGGCCCGG GTCCAGCTGA TCGCGCAGCG CGCCGACGGT CCGCGCCCGA AGTTCGCCGA GCACCCCGAC GCCGAGACCG AGGCCCGCGA GGTCGCCCGG GAGATCAAGA AGCTGGTGGA CGCGGGCGTC CGGCTCTCCG AGGTCGCCGT GCTCTACCGC ATCAACGCGC AGTCCGAGGA GTACGAGCAG GCGTTCAGCG ACGCCGGCGT GCCCTACATA CTGCGCGGCG TCGAGCGCTT CTTCGAGCGC CCCGAAGTCC GCGAGGCGAT CCAGGTCTGG CTGCGCGGCG CCGCCAAGGC CCGCTCCGAC CACGCCTCCG ACGCCCTCCC CGGCCTCGGC GGCGGCCCGG CCGAAGACGG CGAGGGCGGG AGCCTGGCCA CGGAGGTCCG CGCGATCTTC GCCAGCCACG GCTGGACCCC GCTCGCGCCC AAGGGCGCCG GGCGCCTGCG CGACCGCTGG GAGTCGCTGG CCGCGCTGGT CTCCCTGGCC GAGGAGTACG GCCGCACGCA CCCGGACGCC GGGCTCGACC GGTTCAGCGC CGAGCTGCGC GAGCGCGCCG ACGCCCAGCA CGCGCCGACC GTCGAGGGCG TCACGCTGTC CACCTTCCAC GCCGCCAAGG GCTTGGAGTG GGACGCGGTC TTCCTGGTCG GCATGACCGA GGGCATGATG CCGATCACCT ACGCCGAGAC CCCCGAGCAG GTGGAGGAGG AGCGGCGGCT TCTCTATGTC GGGGTCACCC GCGCTCGCGA GCGGCTGTTC CTGTCGTGGG CGCTGGCGCG CTCCCCGGGC GGCCGGGCTT CGCGTTCCCC GTCGCGGTTC CTGGACGGGC TGCGCGGCGG CGTCGGCCGC GACACCCGCG AGGGCGCGGC GGGCGGCGTC ATAAGAGGCG GTGGCTCCGG ACGGCGCCGC GTCCCCACCT CGTCCGGCGA CAGCGAGGAA CGCCCGCGCC GCACGGTCGA GCCGATCACC TGCCGGGTCT GCCACCGGGC TCTGATCGAC GCCGCCGAGC GCAAGATCGG CCGCTGCGAG GGCTGCCCGA GCACCCTGGA CCCCGAGCTG TACGAGGCGC TGCGCGAATG GCGCTCGGAC CAGGCGAAGA AGCAGAAGCT GCCGGTGTTC GCGGTCTTCA CCGACGCCAC GCTGATCGCG ATCGGCGAGT CGCGGCCCGC CACGCTCGCC GCCCTGATCA AGATCGCCGG GGTCGGCAAG GCGAAGGGGG ACCGCTACGG GGACGAGGTG CTGGGGCTCA TCGCGAGTTC CGAGTCCGGG ACGGCCCAGA GCTCGGCCCG GACCTCTGCT CAGACGTCTG CTCAGAGCTC TGGTTCAGCT CCCAAGCCGC GCACGGCTCA GACGTCCGAG ACGGCTTCCG AGCCCGACCC CGCTCACAAG TCAGGGCAGG CCGCGGCGAG CTGA
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Protein sequence | MPLTHPGSGP VPAAALLDAL DPEQRAVAEA LHGPVCVLAG AGTGKTRAIT YRIAYGVATG EYIPSQVLAV TFTQRAAGEM RGRLRQLGSG GVQARTFHAA ALRQLQYFWP KAVGGPNPQL VDSKIPLVSE AVRRLRLHAE RAELRDLAGE IEWAKSTQVV ADDYAAAAAK AQRTPPRDAA EVAKVYAEYE SAKRDRNAID FEDVLLLTIG IMEERPDIAA TVRNQYRYFT VDEYQDVNPL QQRLLDCWLG ERGDVCVVGD ASQTIYSFTG ADPRYLLDFA DRFDDPTVVK LVRDYRSTPQ VVALANALLD RAEGRAAKAR VQLIAQRADG PRPKFAEHPD AETEAREVAR EIKKLVDAGV RLSEVAVLYR INAQSEEYEQ AFSDAGVPYI LRGVERFFER PEVREAIQVW LRGAAKARSD HASDALPGLG GGPAEDGEGG SLATEVRAIF ASHGWTPLAP KGAGRLRDRW ESLAALVSLA EEYGRTHPDA GLDRFSAELR ERADAQHAPT VEGVTLSTFH AAKGLEWDAV FLVGMTEGMM PITYAETPEQ VEEERRLLYV GVTRARERLF LSWALARSPG GRASRSPSRF LDGLRGGVGR DTREGAAGGV IRGGGSGRRR VPTSSGDSEE RPRRTVEPIT CRVCHRALID AAERKIGRCE GCPSTLDPEL YEALREWRSD QAKKQKLPVF AVFTDATLIA IGESRPATLA ALIKIAGVGK AKGDRYGDEV LGLIASSESG TAQSSARTSA QTSAQSSGSA PKPRTAQTSE TASEPDPAHK SGQAAAS
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