| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7783 |
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| Symbol | |
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| ID | 8339159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 9024714 |
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| End bp | 9026492 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644960867 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_003118448 |
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| Protein GI | 256396884 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.466824 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACTGG ACAGGCGAGG GCCGATCCCG GCCCTTCAGA TGCGGCGGCT GCCCGGGGCG
CGCCTCCACG GCGTGCCGCC GGGCTACACG GCCGTCGCCG TGCTGATCGC CGCGCACGCC
TCGGTGTCCC TGGTCGGCCC GTCCGGCGCG GTCCCGGCCC TGATGGGCGA CGCCGGTCTG
GCCGCCGCGG CGGCCCTGGC GTCCGCGGCG TGCATGCATC GCACGGTCCT GATGGTCCGC
CACTACCGCA TGGCCTGCTT CCGCTGCTAC TCCTGGCTGC TGGCCGGGCT CTCCTGCCTG
GCCGCCGCCG TCGGGAACGC GGTGTGGGCC TGGTACGAAC TGGTCCTGGA CGTCGCCCCG
CCGAGCCCGT CGGCCGCGGA CTGGTCCTTC CTGTTCTTCG GGCCGCTGGC CCTGGCCGCC
TTCGTCACCG CGCACGGCGA GCAGGTCAGC CTGTCGGCGC GGATCAGGCT GCTGCTGGAC
ACCACGCTGG TGGCCGGCTC GCTGTTCGTG GTGGCCTGGG TGGTCGCGCT GGCGCTGGCC
ATCGAGCGGG TCGACTCCCC GGTGCGCACC TTCCTGGTCC TGGGCTACCC GGCCTTCGAC
CTGGCGCTGG TCAGCCTGCT GCTGGCGCTG CGGGCCCGCA CGCCGGGGGA GCGCGGCGGG
ATCGGCACCG GGGTGCGGGT CGGCTACCTG ATGATCGTGG TCTGCGACTC CATCTTCACC
ATGCCCGCGG TCCGGAACGG CTACCGGTCC GGCGGGCTGT TGGACACCGG CTGGTTCGCC
GGCTACCTGG TCATCGCGGT GGCCGCCTGG TACGGCGACG GCTGGCGGCC CGAGCGCGTC
GGCCGCGACG CGTCCGGCGC CGGGCAGGAC TCCGCCTGCG GCGCCGGCTG CTCGATCGGG
CTGCACGACT GCGACGCCGC CACCGGCCGC GAGGTCGCGC TCACCATCGC CGCGCCGGAC
ATCCCCGCCC CCGGCGGCAC GCGGTTCATC GACTCGCCGT CCCGCTGGGG CTCGTTGCTG
CGGACGGTGC GGGGGATACT GCCGTATCTG GCTGCGGCCT TCTGCCTGGC CGGAGTCCTG
GCCGACGGGT TGGACACGGC GCGCCGCATG GACCCGGTGG TGCTGATCGC CGGCGCCGCG
GTGCTGGTCG CGCTGGTCGC CCGGCAGGCG CTGACGCTGT TCGAGAACCA GCGCCTGACC
GAGGACCTGC GCCGCGCCGC CGCCACTTTG CAGCACCACG CGTACCACGA CCCGCTCACC
GGACTGGCCA ACCGCGCGCT GCTCACCGAC CGGCTGGAGC ACGCGCTGAC CCAGCGGCAG
GCCGAATGGG AGCCGGTCGC GGTGATCTTC CTGGACCTGG ACGGCTTCAA GGGGGTCAAC
GACTCCGTCG GCCACGAGAC CGGCGACCGG GTCCTGGTCG AGGCGGCGGG CCGGATCTCC
GGCTCGCTGC GGGTCGGGGA CACCGTGGCC CGGTTCGGCG GGGACGAGTT CGTGATCGTG
CTCGAGGTCG GCACGACCGT CGGCGGCGCG CTGGTGGTCG CCGAGCGGAT CCGCGGGCGG
CTGTGTGAGG AGTACCGCAT CGAAGGGCCG GCGCACCACC TCGGCGCCTC GATCGGCGTG
GCGTTCTCCG AGCCCGGCGG TTCGGCGTCC AACCTGCTGC GGCGCGCCGA CGCCGCGATG
TACCGGGCCA AGACCGCCGG GCGCAACCGC GTGGTCGCCG AACCGCTCGC GGCCACCTGG
GCCATTTCGC ATGGCGAGAC CGCTCCGATC AATGCTTGA
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| Protein sequence | MGLDRRGPIP ALQMRRLPGA RLHGVPPGYT AVAVLIAAHA SVSLVGPSGA VPALMGDAGL
AAAAALASAA CMHRTVLMVR HYRMACFRCY SWLLAGLSCL AAAVGNAVWA WYELVLDVAP
PSPSAADWSF LFFGPLALAA FVTAHGEQVS LSARIRLLLD TTLVAGSLFV VAWVVALALA
IERVDSPVRT FLVLGYPAFD LALVSLLLAL RARTPGERGG IGTGVRVGYL MIVVCDSIFT
MPAVRNGYRS GGLLDTGWFA GYLVIAVAAW YGDGWRPERV GRDASGAGQD SACGAGCSIG
LHDCDAATGR EVALTIAAPD IPAPGGTRFI DSPSRWGSLL RTVRGILPYL AAAFCLAGVL
ADGLDTARRM DPVVLIAGAA VLVALVARQA LTLFENQRLT EDLRRAAATL QHHAYHDPLT
GLANRALLTD RLEHALTQRQ AEWEPVAVIF LDLDGFKGVN DSVGHETGDR VLVEAAGRIS
GSLRVGDTVA RFGGDEFVIV LEVGTTVGGA LVVAERIRGR LCEEYRIEGP AHHLGASIGV
AFSEPGGSAS NLLRRADAAM YRAKTAGRNR VVAEPLAATW AISHGETAPI NA
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