| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7777 |
|---|
| Symbol | |
|---|
| ID | 8339153 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 9016992 |
|---|
| End bp | 9018044 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644960861 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003118442 |
|---|
| Protein GI | 256396878 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.551458 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCTGACG ACATCCCGCC GCGGGACGTC AACGACGAGC CGGGGGAGTC CGACCTCCCC
GGGACCCCGG GCGGCCGGGG CGCGGAGTTC CTGGGCGAGC AGGGCCAGCA GCCCGGGCTG
ATGATAGACG CCGTCACCCC GGGCGGCGAG GACATACTGC AGTCGGGCAC CGAGCCGGCC
GACACCGAGT TCACGATCGC CGCGCGCAAC CAGTGGCAGC TGGTGCTGCG CCGCTTCCGG
CAGCACAAGC TGGCGGTGGC CTCGGCGGTG GTGCTGCTGC TGGTGATCCT GTTCGCCACC
CTCGGGCCGG CGATCTGGAA GTACGGCCCG AACGACTTCA GCAACGACTT CTCGGTCGCG
CCCTCGCTCA GCCATCCCTT CGGCACCGAC TCCAACGGCG CCGACCACAT GGCGCAGGTG
ATGGCCGGGA CCCAGCTGTC GCTGAAGATC GCCTTCACCG TGGCGATCGC CGGCACCGTC
TTCGGCTCGA TCTACGGCGC GATCTCCGGC TTCTACCGCG GCGCCACCGA CACCCTGATG
ATGCGCCTGG TCGACCTGGT GCTGACCATC CCGGCGCTGG CCGTCGGCGC GCTGCTGGGC
AAGAAGTTCG GCAACAACTG GGTGCTGCTG GCCGTGGTGC TGGCCGGCCT GCTGTGGACC
GGCTCGGCCC GCGTGGTGCG CGGGCAGGTG CTCTCGGTGC GCGAGAAGGA GTACATCGAG
GCGGCGCGGG CGCTGGGCGC CACCGACCGG CGGATCATCT TCCGGCACAT CCTGCCGAAC
GTGGCCGGCC CGATCATCGT GCTGTTCACC CTGCTGGTGG CCGCCGCGGT GCTGACCGAG
ACGGCGCTGA GCTATCTGGG CTTCGGCGTG CAGTTCCCGG ACATCTCCCT GGGCTCGCTG
ATCACCAGCG GCGAGACCGC GGCGACCGGC GGCAGAGGCT GGCTGTTCTA CTTCCCGGGC
CTGTTCATCA TCCTGATCGC GCTGACCGTG AACTTCATCG GCGACGGCCT GCGCGACGCC
CTCGACCCGA CGCAGACGAA GGCCCGCGCA TGA
|
|---|
| Protein sequence | MADDIPPRDV NDEPGESDLP GTPGGRGAEF LGEQGQQPGL MIDAVTPGGE DILQSGTEPA
DTEFTIAARN QWQLVLRRFR QHKLAVASAV VLLLVILFAT LGPAIWKYGP NDFSNDFSVA
PSLSHPFGTD SNGADHMAQV MAGTQLSLKI AFTVAIAGTV FGSIYGAISG FYRGATDTLM
MRLVDLVLTI PALAVGALLG KKFGNNWVLL AVVLAGLLWT GSARVVRGQV LSVREKEYIE
AARALGATDR RIIFRHILPN VAGPIIVLFT LLVAAAVLTE TALSYLGFGV QFPDISLGSL
ITSGETAATG GRGWLFYFPG LFIILIALTV NFIGDGLRDA LDPTQTKARA
|
|---|
| |