Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7762 |
Symbol | |
ID | 8339138 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 9001008 |
End bp | 9002231 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644960846 |
Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
Protein accession | YP_003118427 |
Protein GI | 256396863 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCCACA CCGTGCGCGA CATCATCCTT CTCGGCTCGA CCGGTTCCAT CGGCACCCAG ACCCTGGACC TGGTCGCCCG CAATCCCGAC CGCTTCCGCA TCGTCGGGTT GGCCGCCGGC GGCGGGAATC CGGAGCTCCT CGCCGAGCAG GCGCTGGCCA CCGGCGCGCG CACCGTGGCC GTCGCCAAGG GCAGTGCCGC GCAGGACCTG AACCTCGCCT TCTACGCCTC GGCCAAGAAA CGCGGCTACT CCGCCGGCGA GTTCCAGATC CCTGAGATCC TCGCCGGGCC CGACGCCGCC ACCGAACTCG CCGCCCGCGC GTGCGACATC GTCCTGAACG CCATCGACGG CGCCGCCGGT CTGAAGGCCA CGCTGGCCGC CCTGGACGCC GGCCGGACCC TCGCGCTGGC GAACAAGGAG TCGCTGATCA TCGGCGGCGA CCTGGTCGCC CGCCGCGCCA AGCCCGGGCA GATCGTCCCG GTCGACTCCG AACACTCCGC GCTGGCGCAG GCGCTGCGCG GCGGTCGCGC GGAGGAAGTT GAGAAGCTCA TCGTCACGGC CTCCGGCGGT CCGTTCCGCG GCCGGACCCG CGCGGAGATG GCGGACGTGT CGCCCGAACA GGCGATGAAG CACCCGACCT GGACCATGGG ACCGCTGGTC ACCTGCAATT CCTCGACCCT GGTGAACAAG GGCCTGGAGG TGATCGAGGC GCATCTGTTG TTCGACGTCC CCTTCGAGCG CATCGAGGTC GTGGTGCACC CGCAGTCCAT CGTGCACTCC ATGGTGCAGT TCGTGGACGG CTCGACCCTG GCCCAGGCCA GTCCGCCGGA CATGCGGCTG CCGATCGCCC TGGCGCTCGG CTGGCCCGAC CGGATCCCCG GCGCCGCCCC GGCCATAGAC TGGACCAAGG CCTCCACCTG GGAGTTCTTC CCGCTGGACG ACGAGGCGTT CCCCTCGGTC CGGCTGGCCA AGCAGGTCGG CGCAACCGGT GGGACCGCCC CGGCGGTCTT CAACGGTGCC AACGAGGAGT GTGTGGCGGC GTTCCTCGCC GGCCGCCTCC GCTTCCCGGC GATCGTCGAT ACCATCGAAC GGGTGGTCGC CGAACACGCC GGTTCAGCGC GCTCTCAGGG TGGGGACCTT ACCCTGGAGG CCGTTCTGGA GGCGGATTCC TGGGCGCGTA CGCGCGCGCG GGAACTCACA ACCGGCGGAC AGACATTGAG CTGA
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Protein sequence | MTHTVRDIIL LGSTGSIGTQ TLDLVARNPD RFRIVGLAAG GGNPELLAEQ ALATGARTVA VAKGSAAQDL NLAFYASAKK RGYSAGEFQI PEILAGPDAA TELAARACDI VLNAIDGAAG LKATLAALDA GRTLALANKE SLIIGGDLVA RRAKPGQIVP VDSEHSALAQ ALRGGRAEEV EKLIVTASGG PFRGRTRAEM ADVSPEQAMK HPTWTMGPLV TCNSSTLVNK GLEVIEAHLL FDVPFERIEV VVHPQSIVHS MVQFVDGSTL AQASPPDMRL PIALALGWPD RIPGAAPAID WTKASTWEFF PLDDEAFPSV RLAKQVGATG GTAPAVFNGA NEECVAAFLA GRLRFPAIVD TIERVVAEHA GSARSQGGDL TLEAVLEADS WARTRARELT TGGQTLS
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