Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7760 |
Symbol | ispG |
ID | 8339136 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 8998338 |
End bp | 8999507 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644960844 |
Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
Protein accession | YP_003118425 |
Protein GI | 256396861 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACCGCCA TCGCGCTGGG CATGCCCGCA CTCCCGACCA AGCCGCTTGC CGTCCGCCGC AAGTCCCGCC AGATCATGGT GGGGAACGTC CCGGTGGGCG GGGACGCGCC GGTCTCGGTG CAGTCGATGA CCACGACCCT CACCGCCGAC GTGAACGCCA CGCTCCAGCA GATCGCGCAG CTCACCGCCG CCGGCTGCCA GATCGTGCGG GTCGCGGTGC CCTCCCAGGA CGACGCCGAC GCGCTGCCCC AGATCGCGCG CAAGTCGCAG ATCCCGGTCA TCGCCGACAT CCACTTCCAG CCCAAGTACG TCTTCGCCGC GATCGACGCC GGCTGCGCCG CGGTGCGGGT GAACCCGGGC AACATCAAGG CCTTCGACGA CAAGGTCGGC GAGATCGCCA AGGCGGCCAA GGCCGCCGGC GTCCCGATCC GGATCGGCGT GAACGCCGGC TCCCTGGACA AGCGGCTGTA CGAGAAGTAC GGCAAGGCCA CCGCCGAGGC GCTGGTGGAA TCCGCGCTGT GGGAGTGCTC GCTGTTCGAG GAGCACGACT TCCGCGACAT CAAGATCTCG GTCAAGCACA ACGACCCGGT CGTGATGATC AACGCCTACC GGCTGCTGGC CGAGGCCTGC GACTACCCGC TGCACCTCGG CGTCACCGAG GCCGGCCCGG CGTTCCAGGG CACGATCAAG TCCGCCGTCG CCTTCGGCGC GCTGCTGTCC GAGGGCATCG GCGACACCAT CCGCGTCTCG CTGTCCGCCC CGCCGGTGGA AGAGGTGAAG GTCGGCGCGC AGATCCTGGA GTCCCTCGGC CTGCGCAAGC GCGGCCTGGA GATCGTCTCC TGTCCCTCCT GCGGCCGGGC GCAGGTCGAC GTCTACAAGC TCGCCGACCA GGTCAGCGCC GCGCTCGACG GGCTGAAGGT ACCCCTGCGG GTGGCCGTCA TGGGCTGCGT CGTGAACGGT CCGGGCGAGG CGCGCGAGGC GGACCTCGGG GTGGCCTCCG GCAACGGCAA GGGCCAGATC TTCGTGCGCG GCGAGGTCAT CAAGACCGTG CCGGAGGCGC AGATCGTGGA GACCTTGATC GAGGAGGCGT TCAAGCTCGC CTCGGAGATG GGTCTGGAGA TCGACGCCGA GACCGGTGAG ATCGTGGAGT CTGTGAACGC CGCGCTTTAG
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Protein sequence | MTAIALGMPA LPTKPLAVRR KSRQIMVGNV PVGGDAPVSV QSMTTTLTAD VNATLQQIAQ LTAAGCQIVR VAVPSQDDAD ALPQIARKSQ IPVIADIHFQ PKYVFAAIDA GCAAVRVNPG NIKAFDDKVG EIAKAAKAAG VPIRIGVNAG SLDKRLYEKY GKATAEALVE SALWECSLFE EHDFRDIKIS VKHNDPVVMI NAYRLLAEAC DYPLHLGVTE AGPAFQGTIK SAVAFGALLS EGIGDTIRVS LSAPPVEEVK VGAQILESLG LRKRGLEIVS CPSCGRAQVD VYKLADQVSA ALDGLKVPLR VAVMGCVVNG PGEAREADLG VASGNGKGQI FVRGEVIKTV PEAQIVETLI EEAFKLASEM GLEIDAETGE IVESVNAAL
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