| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7739 |
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| Symbol | |
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| ID | 8339115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 8977425 |
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| End bp | 8978342 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644960823 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_003118404 |
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| Protein GI | 256396840 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCAAGC GGACGAAGGC CGACGACGGT CCCGGCGGTC TGGTGATCGT CGACAAGCCG
GCCGGCTGGA CCTCGCACGA CGTGGTGGGC CGGGTGCGCC GGCTGGCGCG CACCCGGCGG
GTCGGCCACG CCGGCACGCT GGACCCGATG GCCACTGGCG TGCTCGTGGT GGGCGTGGAG
AAGACCACCC GGCTGCTGGG CCACCTCGCC CTGACCCGGA AGACCTACGA GACCACCATC
CGCCTGGGGC AGAGCACGAT CACCGACGAC GCCGAGGGCG AGACCACCGA CCGCGCCGAC
GCCTCGAACG TGTCAGATGA CATGGTCCGT GGCGCGATTC CGTCGTTCGT CGGCGCGATC
ACGCAGCGCC CCTCGGCGGT CTCGGCGATC AAGGTGGACG GCGTCCGGTC CTACAAGCGG
GTGCGCGAGG GCGAGGCGGT GGAGCTGGCC GCGCGGCCGG TGACGATCCA CCGCTTCGAC
GTCCTCGCCG TCCGCCGCGA AGGCGCGCTG CTCGATGTGG ACGCCATAGT CGAGTGCTCG
TCCGGGACCT ACATCCGGGC TCTGGCGCGC GACCTCGGCG CGACGCTCGG CGTCGGCGGG
CATCTCACGA TGCTGCGGCG CACCGCGGTC GGTCCCTACG GGCTGGCCCT GGCGCACCCG
CTGGCCGAGC TGACCGAGCT GGTCGACGGC GGCGGGGAGC TGCCGGTCGT GCCGCTGGAC
GTGGCGGCGC GCGCGGCGTT CCCGGTGCGG GAGCTCGACG CCGAGGAGGC CGCCGCGGTG
GCGCACGGCG GCTTCCTGGA GCCCTCCGGG CGTCCCGGGG AGCAGGTGGC GGTCTTCGGG
CCGGACGGGC GGTTCCTGGC GCTGTACGAG GATCTGCCGA GCGGCAGGAA GGCGAAGCCG
GCCGCGGTCT TCATCTGA
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| Protein sequence | MAKRTKADDG PGGLVIVDKP AGWTSHDVVG RVRRLARTRR VGHAGTLDPM ATGVLVVGVE
KTTRLLGHLA LTRKTYETTI RLGQSTITDD AEGETTDRAD ASNVSDDMVR GAIPSFVGAI
TQRPSAVSAI KVDGVRSYKR VREGEAVELA ARPVTIHRFD VLAVRREGAL LDVDAIVECS
SGTYIRALAR DLGATLGVGG HLTMLRRTAV GPYGLALAHP LAELTELVDG GGELPVVPLD
VAARAAFPVR ELDAEEAAAV AHGGFLEPSG RPGEQVAVFG PDGRFLALYE DLPSGRKAKP
AAVFI
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