| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7719 |
|---|
| Symbol | |
|---|
| ID | 8339095 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 8957078 |
|---|
| End bp | 8957929 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644960803 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003118384 |
|---|
| Protein GI | 256396820 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0395] ABC-type sugar transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGCCG CCTACCGCAG GGCCCCGCGG CGGGCCATGA CCGCCTTCTG GAACAGCGTG
GCGATGCTGG TCGCCATCGT GCTGGGCTTC CCGATCTACT GGATGCTGCT GACCACGGTG
AAGTCCAACA AGGACCTCAT CTCCCAGCAC CCGACGTTCT GGCCGTCGCA CTTCGACTTC
TCGTCCTTCT CCTCGGCGAT GGACGACAAC TTCGGCGCGA ACCTGTGGAA CACCGTGGTG
ATCACGCTGG GCTCGGTGTT CATCAGCCTG GCGGTCGGAC TGCTCGCCGC GCTGGCCGTG
GCCCGTTTCG ACTTCCGCGG GCGCAAGCCG TTCATCGTGG CGATCCTGGT GGTCCAGATG
GTGCCGCTGC TGACCATCCT GGTCGGCCTG CTGCCGCTGC TGAACTCCAC CAACCTCTAC
GGCTCGGTGC TCGGCGTGAT CCTGGCCTAC CTGGTCTTCA CGATCCCGTT CATCATCTGG
ACGCTGCGGA CGTACATCGT CGGCATCCCG GTCGAGCTGG ACGAGGCGGC CATGGTCGAC
GGCTGCACCA AGGCCCAGGC CTTCCGCCGG GTCGTGCTGC CGCTGCTGGC GCCCGGACTG
GTCTCCACCG GCGTGTTCGC CTGGATCCAG GCCTGGAACG AGTTCGTGAT GGCGCGGGAG
ATCCTCGCGC CGGCCCAGAA CAAGACGGCC ATGGTGTGGC TGACGTTCTT CAGCGACACC
CCGACCCACG GCTCGGACTA CTCCGGGCAG ATGGCCGGCG CGCTGATCAT CGCCGCTCCC
GTCATCATCT TGTTCACCGT CTTCCAAAGC CGCCTGTCGA CCGGTCTCAC CGCCGGCGCG
GTGAAGGGGT AG
|
|---|
| Protein sequence | MSAAYRRAPR RAMTAFWNSV AMLVAIVLGF PIYWMLLTTV KSNKDLISQH PTFWPSHFDF
SSFSSAMDDN FGANLWNTVV ITLGSVFISL AVGLLAALAV ARFDFRGRKP FIVAILVVQM
VPLLTILVGL LPLLNSTNLY GSVLGVILAY LVFTIPFIIW TLRTYIVGIP VELDEAAMVD
GCTKAQAFRR VVLPLLAPGL VSTGVFAWIQ AWNEFVMARE ILAPAQNKTA MVWLTFFSDT
PTHGSDYSGQ MAGALIIAAP VIILFTVFQS RLSTGLTAGA VKG
|
|---|
| |