Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7693 |
Symbol | |
ID | 8339069 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 8927104 |
End bp | 8930895 |
Gene Length | 3792 bp |
Protein Length | 1263 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644960777 |
Product | Phosphoprotein phosphatase |
Protein accession | YP_003118358 |
Protein GI | 256396794 |
COG category | [S] Function unknown |
COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAATCCGG ACATCGACCA CATCAGACGA CTGATCAGCG ACCGTCTCAC CACCGAGGAC ACCGGTGAGG TCGGCCTGGA CCTGTCCAAT CTGGGTCTGA CCGGGCTGCC CGCGGAATTC GGCCGCCTGC CGGAGCTCGG GCCCGTCACC TTCCTGAACC TGTCGGGCAA CCGTCTGGCG ACGCTGCCCG AGACGCTCGG CGAGGTGACG GGTCTGCGCC GGCTGTGGCT GGACAGCAAC GGCTTCGGGG AGCTGCCGCC GCAGGTGGCG CTGCTCGGCG GGCTGGTCGA GCTGAGCCTG ACCGGCAACG GCCTGACCAC GCTCCCCGAG GAGTTCGCGC GGCTGGAGCG GCTGACCAGT CTGTGGCTCG ACGAGAACGC GTTCACAGCG CTTCCCGAAG TCGTCGGACA TCTGAGCAGC CTGACGCAGT TGTACCTGCA GAAGAACCAG CTGCCCGGAC TGCCGGACTC CTTAGGCGCG CCGAGCCTGC ACACCCTGGT CCTGGACGGC AACCACCTCG CCGAACTGCC GGACTGGATC GGCGACACCC AGAGCCTGGT CGCGCTGTCG GCGGACGACA ACGTCCTGAC CGAGCTGCCG CCGAGCATCG GGGCCCTGAT CCGGCTGCAG GAGCTGAGCC TGACCGGCAA CCGGCTGCGC AAGCTGCCGA CCTCGATCGG CGACATGGCC TCGCTGACCA AGCTGTACCT GCAGAAGAAC CAGCTGCAGA CGCTCCCGGC GTCCATCGGC AATCTCAGCG AACTGCAGAC CCTCGCGCTC AGCGGCAACC ACCTGGAGGA GCTGCCGGCC TCGGTGGCGG ACCTGAGCCG GCTGACCGAG CTGAACCTGG CCGACAACTG GCTGACCCAC GTCCCGGAGG CGATCGGCCG CCTGGCCTCG CTGGACAAGC TGAGCCTGAC CTACAACCGG CTCACCGAGC TGCCGCCCTC ACTCGGCGCG CTGCGTGTGC TGACCGCGCT CGACGTCTCC CGCAACAGCC TGCACGACCT GCCGGACAGC TTCGACGGCC TGGCCAACCT GGACACCCTG AACCTGGCAC AGAACCCACT GACGTCGCTG CCGTCCTCGG TCGGGGCGCT GAAGCGGCTG ACGTGGCTCT CACTCGCGTA CTGCGACCTG GAGACGCTGC CCGCCGGCCT CGGCGGCCTG CATCGCCTGG AGACCCTGGA CCTGGTCGGC AACAACCTGC GCGACCTCCC CTTCCAGCTG TCGGGCCTCG GCGCGCTCAC CACCCTGAAC CTGGCGTCGA ACCAGCTGTC CTGGGTGCCC CGCACCTTGG GCCTGCTCCG CAACCTGGTG AACCTGGACC TGGCGGACAA CGAACTGTCC TCCCTCCCGC GCGCCCTCGG CGGCCTGGAG TCCCTGCGCA AACTGGACGT CGCGGAGAAC CAGCTGACCT GGATCCCGCG CTCGGTCTGC GACCTGCCGA AGCTGGAAAC CCTGGTCCTG CGCGGCAACC GCCTGGCGGA CCTGCCGACG AGCAACTGGC AGAAGCTGAC CCTGAAGGAG CTCGACCTCA GCGACAACCC GCTGCTGTCC GCCGTTCCCG AGAACTGGGA CGTCGGCACG ATGGCGCTCG CCGCCGACAA GGCGCTCTAC GGCGCCCTCG GCGACCGCGT CCCGGCGGAC AAGCGCGACG CCGTCGCCCA AGCCGGCGTC GAGGAGGCCG AGCGCGCACG CCGCCACGAG GCGGACGCCA TCGCCGGCAT CGTCGGCGGC GTGGTCCACG CCGAGGCGGC GCTGATGGCG CAGGCGGCGG AGGCCGCCGT GGAAGCGGCG GTCGAGGAGG CGTTCGCCGA GGCGGCGGCC GCGGCGGGAG ACGCCGAGCC GGAGCCCGCG GCAGAACCCG AGTCCGGGAC CGAGCCCGAG CTGGAGGCGA CGGCTGCGGA GGAGCTGCCC GCCGAACCCG CCGATGTGCA GCCGGAACCG GTGACAGCCG AGGCCTTCGC GCAAGCGATC GTGTCGGAGG AGATCGACTC CGAACTCGCC GAAGTCCTGA ACGCCGGCGG TGTCCTGGAC GCGGCGGTGG CGGCAGCCGA GGCACAGGTC CTCGCAGCAC TGCACGCCGC GGATGAGAAC GCGTTGCGCG CGCTCGCTCG TGCGGTGCTC GAGGAAGCTG CCGACGACGT TCGCCGGGCC CTGGCCGCGG AAGTGATCGT CGGCGCTGTC GCCGAGGAAG CCGGATCACC CGAGCTGGCA ACAGAGATCG CCGAAGCGGC GGCCGAATTC GTCGACGACA AGGCAGTGGC GCTCGCCGCG CAAGCCGTCG CCGCAGCCGA GGCCGGCAAC GACGAGGCGG CCCTGACCGC GGCGCACGCA GCAGCGGCGG CCGAGGAGGC CGCACTACTG GCGGACATGG TGGCCGAGGC CAACCGCGCC GACGAGGCAG AGGCAGCCGC GGCGGCGGAA GCAGCTGCCC AGGCGGCCGC CGAACAGGCG GCGGCGGAGG CCGAGCAGGT TGGTGGCTAT ACGGCTGCCC ACGGCGAAAA CGGTGTGGCC GCTCAGACCG CGATGCCCGC CGAGCAGCAA GACGACGATG CTCTGCAGCC CGATGCCCTA CAGCCAGATG CGCTGGAGCA GGCTGTGTTC GGCGGGCACC AGGAGAATCG CGCCCCGCAG GCCGATGTCG AACAGCAGGC CATGTTCGCC CGCCAGCTGG AGAATCACGT CCTGCAGCCC GACGCCGCAC AGCTAGAGAG CCGCACCCAG CACACCGATG CGGACCAGGC TGTGTTCGGC GGGCAGCAAG ACAATCGTGT CCCGCAAGCT GATGCCGACC AGGCAGTGTT CGGTGCGCTC CAAGACAATC GCGTCCCCCA GGGTGGCTTC GGCGGGCAGC AAGACAATCG TGTCCCACAG GCTGATGTCG ACCAGGCAGT GTTCGGTGCG CTCCAAGACA ATCGCGTCCA GCAGGCCGAC GTTGATCAGG CTGTCTTCGG CGGGCAGCAG GACAATCGAG TCCCGCAGGC TGATGTTGGC CAGGCGGTGT TTGGCGCGCA GCAAGATAAT CGCGTCCCAC AGGCCGATGT GAACCAGGCA GTGTTCGGCG GGCAGCCAGA TCCCCGCGTC TCGCAAGCTG ATGCGGAGCA GGCTGCTTTC GGTGAGAGCC GCATGCCGCA GGCCGATGTG GACCAGCCCG TCTTCGGCGA CCCGCAGGAC CCCCGCGCCT CACACGCCGA TGTGCGGCAG TCCGTCTTCG CCGAGCCGCA GGACCCTCGC GTTCCGCAGC CTGCTGCCGT CCAGGCTGAT GAGCCGACGG TCGTCCAGGA GTCTCCTGCT GAGGAGGCCC AGTACGTCGA GACCCTCTCC GCCGAGGAGC GTCGTGCCCG TGCCGGGCGG CGTGCGGCTG CTGTTGCCGG GGAGTCGCTT CCGCCGGCCA CTGCCGGGGT GCCGCAGCAG CGGGGGGTGG CGCTTGCTGA GAGTCGGCTG CTGGCCGAGT CCGAGCAGCA GGCTGAGGCG TTCGCCGCTG CTCAGCGTGA GGCTGCGGTG CTGGCTGAGT CCGGCGATCA TGTCGTGGTC GAGGAGCCGG TCGCCGTGGT GGAGGAGCCG CCGCTGGTGT TCCAGCCGGT GCCGGATCAG CCGACTGTGG TGTTCGACGG TCCGGCTGTG GTGGTCGATG AGGAAGTCGT CGATGTCGTC GAGGGACCCG GTTCCTTCGA GGAGCGGGCT TGGCCCGGCG GGGAGTTCGA GGCCGACCGC ACCCACGTCG GCACGCCTCC CGGCTACGGG CCGCCGCCGG CGCCCTCGCA GCCCTGGCGC AGCAGCAGCT GA
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Protein sequence | MNPDIDHIRR LISDRLTTED TGEVGLDLSN LGLTGLPAEF GRLPELGPVT FLNLSGNRLA TLPETLGEVT GLRRLWLDSN GFGELPPQVA LLGGLVELSL TGNGLTTLPE EFARLERLTS LWLDENAFTA LPEVVGHLSS LTQLYLQKNQ LPGLPDSLGA PSLHTLVLDG NHLAELPDWI GDTQSLVALS ADDNVLTELP PSIGALIRLQ ELSLTGNRLR KLPTSIGDMA SLTKLYLQKN QLQTLPASIG NLSELQTLAL SGNHLEELPA SVADLSRLTE LNLADNWLTH VPEAIGRLAS LDKLSLTYNR LTELPPSLGA LRVLTALDVS RNSLHDLPDS FDGLANLDTL NLAQNPLTSL PSSVGALKRL TWLSLAYCDL ETLPAGLGGL HRLETLDLVG NNLRDLPFQL SGLGALTTLN LASNQLSWVP RTLGLLRNLV NLDLADNELS SLPRALGGLE SLRKLDVAEN QLTWIPRSVC DLPKLETLVL RGNRLADLPT SNWQKLTLKE LDLSDNPLLS AVPENWDVGT MALAADKALY GALGDRVPAD KRDAVAQAGV EEAERARRHE ADAIAGIVGG VVHAEAALMA QAAEAAVEAA VEEAFAEAAA AAGDAEPEPA AEPESGTEPE LEATAAEELP AEPADVQPEP VTAEAFAQAI VSEEIDSELA EVLNAGGVLD AAVAAAEAQV LAALHAADEN ALRALARAVL EEAADDVRRA LAAEVIVGAV AEEAGSPELA TEIAEAAAEF VDDKAVALAA QAVAAAEAGN DEAALTAAHA AAAAEEAALL ADMVAEANRA DEAEAAAAAE AAAQAAAEQA AAEAEQVGGY TAAHGENGVA AQTAMPAEQQ DDDALQPDAL QPDALEQAVF GGHQENRAPQ ADVEQQAMFA RQLENHVLQP DAAQLESRTQ HTDADQAVFG GQQDNRVPQA DADQAVFGAL QDNRVPQGGF GGQQDNRVPQ ADVDQAVFGA LQDNRVQQAD VDQAVFGGQQ DNRVPQADVG QAVFGAQQDN RVPQADVNQA VFGGQPDPRV SQADAEQAAF GESRMPQADV DQPVFGDPQD PRASHADVRQ SVFAEPQDPR VPQPAAVQAD EPTVVQESPA EEAQYVETLS AEERRARAGR RAAAVAGESL PPATAGVPQQ RGVALAESRL LAESEQQAEA FAAAQREAAV LAESGDHVVV EEPVAVVEEP PLVFQPVPDQ PTVVFDGPAV VVDEEVVDVV EGPGSFEERA WPGGEFEADR THVGTPPGYG PPPAPSQPWR SSS
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