Gene Caci_7693 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7693 
Symbol 
ID8339069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8927104 
End bp8930895 
Gene Length3792 bp 
Protein Length1263 aa 
Translation table11 
GC content70% 
IMG OID644960777 
ProductPhosphoprotein phosphatase 
Protein accessionYP_003118358 
Protein GI256396794 
COG category[S] Function unknown 
COG ID[COG4886] Leucine-rich repeat (LRR) protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATCCGG ACATCGACCA CATCAGACGA CTGATCAGCG ACCGTCTCAC CACCGAGGAC 
ACCGGTGAGG TCGGCCTGGA CCTGTCCAAT CTGGGTCTGA CCGGGCTGCC CGCGGAATTC
GGCCGCCTGC CGGAGCTCGG GCCCGTCACC TTCCTGAACC TGTCGGGCAA CCGTCTGGCG
ACGCTGCCCG AGACGCTCGG CGAGGTGACG GGTCTGCGCC GGCTGTGGCT GGACAGCAAC
GGCTTCGGGG AGCTGCCGCC GCAGGTGGCG CTGCTCGGCG GGCTGGTCGA GCTGAGCCTG
ACCGGCAACG GCCTGACCAC GCTCCCCGAG GAGTTCGCGC GGCTGGAGCG GCTGACCAGT
CTGTGGCTCG ACGAGAACGC GTTCACAGCG CTTCCCGAAG TCGTCGGACA TCTGAGCAGC
CTGACGCAGT TGTACCTGCA GAAGAACCAG CTGCCCGGAC TGCCGGACTC CTTAGGCGCG
CCGAGCCTGC ACACCCTGGT CCTGGACGGC AACCACCTCG CCGAACTGCC GGACTGGATC
GGCGACACCC AGAGCCTGGT CGCGCTGTCG GCGGACGACA ACGTCCTGAC CGAGCTGCCG
CCGAGCATCG GGGCCCTGAT CCGGCTGCAG GAGCTGAGCC TGACCGGCAA CCGGCTGCGC
AAGCTGCCGA CCTCGATCGG CGACATGGCC TCGCTGACCA AGCTGTACCT GCAGAAGAAC
CAGCTGCAGA CGCTCCCGGC GTCCATCGGC AATCTCAGCG AACTGCAGAC CCTCGCGCTC
AGCGGCAACC ACCTGGAGGA GCTGCCGGCC TCGGTGGCGG ACCTGAGCCG GCTGACCGAG
CTGAACCTGG CCGACAACTG GCTGACCCAC GTCCCGGAGG CGATCGGCCG CCTGGCCTCG
CTGGACAAGC TGAGCCTGAC CTACAACCGG CTCACCGAGC TGCCGCCCTC ACTCGGCGCG
CTGCGTGTGC TGACCGCGCT CGACGTCTCC CGCAACAGCC TGCACGACCT GCCGGACAGC
TTCGACGGCC TGGCCAACCT GGACACCCTG AACCTGGCAC AGAACCCACT GACGTCGCTG
CCGTCCTCGG TCGGGGCGCT GAAGCGGCTG ACGTGGCTCT CACTCGCGTA CTGCGACCTG
GAGACGCTGC CCGCCGGCCT CGGCGGCCTG CATCGCCTGG AGACCCTGGA CCTGGTCGGC
AACAACCTGC GCGACCTCCC CTTCCAGCTG TCGGGCCTCG GCGCGCTCAC CACCCTGAAC
CTGGCGTCGA ACCAGCTGTC CTGGGTGCCC CGCACCTTGG GCCTGCTCCG CAACCTGGTG
AACCTGGACC TGGCGGACAA CGAACTGTCC TCCCTCCCGC GCGCCCTCGG CGGCCTGGAG
TCCCTGCGCA AACTGGACGT CGCGGAGAAC CAGCTGACCT GGATCCCGCG CTCGGTCTGC
GACCTGCCGA AGCTGGAAAC CCTGGTCCTG CGCGGCAACC GCCTGGCGGA CCTGCCGACG
AGCAACTGGC AGAAGCTGAC CCTGAAGGAG CTCGACCTCA GCGACAACCC GCTGCTGTCC
GCCGTTCCCG AGAACTGGGA CGTCGGCACG ATGGCGCTCG CCGCCGACAA GGCGCTCTAC
GGCGCCCTCG GCGACCGCGT CCCGGCGGAC AAGCGCGACG CCGTCGCCCA AGCCGGCGTC
GAGGAGGCCG AGCGCGCACG CCGCCACGAG GCGGACGCCA TCGCCGGCAT CGTCGGCGGC
GTGGTCCACG CCGAGGCGGC GCTGATGGCG CAGGCGGCGG AGGCCGCCGT GGAAGCGGCG
GTCGAGGAGG CGTTCGCCGA GGCGGCGGCC GCGGCGGGAG ACGCCGAGCC GGAGCCCGCG
GCAGAACCCG AGTCCGGGAC CGAGCCCGAG CTGGAGGCGA CGGCTGCGGA GGAGCTGCCC
GCCGAACCCG CCGATGTGCA GCCGGAACCG GTGACAGCCG AGGCCTTCGC GCAAGCGATC
GTGTCGGAGG AGATCGACTC CGAACTCGCC GAAGTCCTGA ACGCCGGCGG TGTCCTGGAC
GCGGCGGTGG CGGCAGCCGA GGCACAGGTC CTCGCAGCAC TGCACGCCGC GGATGAGAAC
GCGTTGCGCG CGCTCGCTCG TGCGGTGCTC GAGGAAGCTG CCGACGACGT TCGCCGGGCC
CTGGCCGCGG AAGTGATCGT CGGCGCTGTC GCCGAGGAAG CCGGATCACC CGAGCTGGCA
ACAGAGATCG CCGAAGCGGC GGCCGAATTC GTCGACGACA AGGCAGTGGC GCTCGCCGCG
CAAGCCGTCG CCGCAGCCGA GGCCGGCAAC GACGAGGCGG CCCTGACCGC GGCGCACGCA
GCAGCGGCGG CCGAGGAGGC CGCACTACTG GCGGACATGG TGGCCGAGGC CAACCGCGCC
GACGAGGCAG AGGCAGCCGC GGCGGCGGAA GCAGCTGCCC AGGCGGCCGC CGAACAGGCG
GCGGCGGAGG CCGAGCAGGT TGGTGGCTAT ACGGCTGCCC ACGGCGAAAA CGGTGTGGCC
GCTCAGACCG CGATGCCCGC CGAGCAGCAA GACGACGATG CTCTGCAGCC CGATGCCCTA
CAGCCAGATG CGCTGGAGCA GGCTGTGTTC GGCGGGCACC AGGAGAATCG CGCCCCGCAG
GCCGATGTCG AACAGCAGGC CATGTTCGCC CGCCAGCTGG AGAATCACGT CCTGCAGCCC
GACGCCGCAC AGCTAGAGAG CCGCACCCAG CACACCGATG CGGACCAGGC TGTGTTCGGC
GGGCAGCAAG ACAATCGTGT CCCGCAAGCT GATGCCGACC AGGCAGTGTT CGGTGCGCTC
CAAGACAATC GCGTCCCCCA GGGTGGCTTC GGCGGGCAGC AAGACAATCG TGTCCCACAG
GCTGATGTCG ACCAGGCAGT GTTCGGTGCG CTCCAAGACA ATCGCGTCCA GCAGGCCGAC
GTTGATCAGG CTGTCTTCGG CGGGCAGCAG GACAATCGAG TCCCGCAGGC TGATGTTGGC
CAGGCGGTGT TTGGCGCGCA GCAAGATAAT CGCGTCCCAC AGGCCGATGT GAACCAGGCA
GTGTTCGGCG GGCAGCCAGA TCCCCGCGTC TCGCAAGCTG ATGCGGAGCA GGCTGCTTTC
GGTGAGAGCC GCATGCCGCA GGCCGATGTG GACCAGCCCG TCTTCGGCGA CCCGCAGGAC
CCCCGCGCCT CACACGCCGA TGTGCGGCAG TCCGTCTTCG CCGAGCCGCA GGACCCTCGC
GTTCCGCAGC CTGCTGCCGT CCAGGCTGAT GAGCCGACGG TCGTCCAGGA GTCTCCTGCT
GAGGAGGCCC AGTACGTCGA GACCCTCTCC GCCGAGGAGC GTCGTGCCCG TGCCGGGCGG
CGTGCGGCTG CTGTTGCCGG GGAGTCGCTT CCGCCGGCCA CTGCCGGGGT GCCGCAGCAG
CGGGGGGTGG CGCTTGCTGA GAGTCGGCTG CTGGCCGAGT CCGAGCAGCA GGCTGAGGCG
TTCGCCGCTG CTCAGCGTGA GGCTGCGGTG CTGGCTGAGT CCGGCGATCA TGTCGTGGTC
GAGGAGCCGG TCGCCGTGGT GGAGGAGCCG CCGCTGGTGT TCCAGCCGGT GCCGGATCAG
CCGACTGTGG TGTTCGACGG TCCGGCTGTG GTGGTCGATG AGGAAGTCGT CGATGTCGTC
GAGGGACCCG GTTCCTTCGA GGAGCGGGCT TGGCCCGGCG GGGAGTTCGA GGCCGACCGC
ACCCACGTCG GCACGCCTCC CGGCTACGGG CCGCCGCCGG CGCCCTCGCA GCCCTGGCGC
AGCAGCAGCT GA
 
Protein sequence
MNPDIDHIRR LISDRLTTED TGEVGLDLSN LGLTGLPAEF GRLPELGPVT FLNLSGNRLA 
TLPETLGEVT GLRRLWLDSN GFGELPPQVA LLGGLVELSL TGNGLTTLPE EFARLERLTS
LWLDENAFTA LPEVVGHLSS LTQLYLQKNQ LPGLPDSLGA PSLHTLVLDG NHLAELPDWI
GDTQSLVALS ADDNVLTELP PSIGALIRLQ ELSLTGNRLR KLPTSIGDMA SLTKLYLQKN
QLQTLPASIG NLSELQTLAL SGNHLEELPA SVADLSRLTE LNLADNWLTH VPEAIGRLAS
LDKLSLTYNR LTELPPSLGA LRVLTALDVS RNSLHDLPDS FDGLANLDTL NLAQNPLTSL
PSSVGALKRL TWLSLAYCDL ETLPAGLGGL HRLETLDLVG NNLRDLPFQL SGLGALTTLN
LASNQLSWVP RTLGLLRNLV NLDLADNELS SLPRALGGLE SLRKLDVAEN QLTWIPRSVC
DLPKLETLVL RGNRLADLPT SNWQKLTLKE LDLSDNPLLS AVPENWDVGT MALAADKALY
GALGDRVPAD KRDAVAQAGV EEAERARRHE ADAIAGIVGG VVHAEAALMA QAAEAAVEAA
VEEAFAEAAA AAGDAEPEPA AEPESGTEPE LEATAAEELP AEPADVQPEP VTAEAFAQAI
VSEEIDSELA EVLNAGGVLD AAVAAAEAQV LAALHAADEN ALRALARAVL EEAADDVRRA
LAAEVIVGAV AEEAGSPELA TEIAEAAAEF VDDKAVALAA QAVAAAEAGN DEAALTAAHA
AAAAEEAALL ADMVAEANRA DEAEAAAAAE AAAQAAAEQA AAEAEQVGGY TAAHGENGVA
AQTAMPAEQQ DDDALQPDAL QPDALEQAVF GGHQENRAPQ ADVEQQAMFA RQLENHVLQP
DAAQLESRTQ HTDADQAVFG GQQDNRVPQA DADQAVFGAL QDNRVPQGGF GGQQDNRVPQ
ADVDQAVFGA LQDNRVQQAD VDQAVFGGQQ DNRVPQADVG QAVFGAQQDN RVPQADVNQA
VFGGQPDPRV SQADAEQAAF GESRMPQADV DQPVFGDPQD PRASHADVRQ SVFAEPQDPR
VPQPAAVQAD EPTVVQESPA EEAQYVETLS AEERRARAGR RAAAVAGESL PPATAGVPQQ
RGVALAESRL LAESEQQAEA FAAAQREAAV LAESGDHVVV EEPVAVVEEP PLVFQPVPDQ
PTVVFDGPAV VVDEEVVDVV EGPGSFEERA WPGGEFEADR THVGTPPGYG PPPAPSQPWR
SSS