Gene Caci_7682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7682 
Symbol 
ID8339058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8915421 
End bp8916284 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content69% 
IMG OID644960766 
ProductNADH dehydrogenase subunit J 
Protein accessionYP_003118347 
Protein GI256396783 
COG category[C] Energy production and conversion 
COG ID[COG0839] NADH:ubiquinone oxidoreductase subunit 6 (chain J) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTTC CGCTCGCTCT GTCGGAGCAG GGCGTGACAC TGGCCGCCGG GCTGAGCAAG 
ACCTCCGACG GCGAGGCGTT CCAGTTCTAC GTCCTGGGCG CCGTGGCGCT GCTCGGGGCG
CTGGGGACGG TCTTCTCCAA GAAGGCCGTG CACTCGGCGC TCTCGCTGGC CATGACCATG
ATCTGCCTGG CGATGTTCTA CCTGGCGCAG GGGGCGTACT TCCTCGGCGT GGTGCAGATC
GTCGTCTACA CCGGCGCGAT CATGATGCTG TTCCTGTTCG TGCTGATGTT GGTCGGCGTC
TCCAGCGCCG ACTCCTTGGT GGAGACCATC AAGGGCCAGC GCAAGCTGGC GGTGCTGGCC
GCGATCGCCT TCGCGGTGCT GATCATGGTG GCCCTGGGCC GCGCGCGGCT GGGGACCTTC
GCGGGCTCCG GGCCGGCCAA CGCCGGCGGC GGCAACGTCA AGAACCTCGC GGACCTGATC
TTCAGCAAGT ACTTCTGGGC CTTCGAAGTC ACCTCGGCGC TGCTGATCAC CGCCGCGGTC
GGCGCGATGG TCATGACCCA CCGGGAGCGC CTGGTGGCCC GCAAGTCGCA GCGCGAACTG
GTCGAGGACC GCGTGCGCAC CGGCAAGCGG ATGACGCCGC TGCCGACGCC CGGTGTCTAC
GCGCGGCACA ACGCGGTGGA CATCCCCGCG CTGCTGCCGG ACGGCTCGGT CGCCGAGGAC
TCGGTGAACG CCACCCTGCA GGCCCGCACC CCGGTGCGCG ACGCGGTCGG TCTGACCGCC
GTCACCCGGG AGAACATGGC GGTGCCGCGG CAGGGCGAGG CTCCCGAGCT CGAAAACGCT
TCGACGAACG GGGCTGCCGA ATGA
 
Protein sequence
MSLPLALSEQ GVTLAAGLSK TSDGEAFQFY VLGAVALLGA LGTVFSKKAV HSALSLAMTM 
ICLAMFYLAQ GAYFLGVVQI VVYTGAIMML FLFVLMLVGV SSADSLVETI KGQRKLAVLA
AIAFAVLIMV ALGRARLGTF AGSGPANAGG GNVKNLADLI FSKYFWAFEV TSALLITAAV
GAMVMTHRER LVARKSQREL VEDRVRTGKR MTPLPTPGVY ARHNAVDIPA LLPDGSVAED
SVNATLQART PVRDAVGLTA VTRENMAVPR QGEAPELENA STNGAAE