Gene Caci_7629 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7629 
Symbol 
ID8339005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8854686 
End bp8855702 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content72% 
IMG OID644960713 
Productoxidoreductase domain protein 
Protein accessionYP_003118294 
Protein GI256396730 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.733324 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGGGA CGAGCGGGAC GAAGCTGCGC GCGGGCCTGA TCGGCCTGGG CATGATGGGC 
CGGCACCACG CGCGGGTGCT GGGTTCGCTG GACGGCGTGG AGCTGGTCGC CGTCGCCGAC
CCCGGCGGCG ACGCGCACGG CGCGGCCAAC GGCCGCCCGG TGCTCGGCGG CGTCGAGGAG
CTGATCGCGG CCGGGATCGA CTTCGCCGTG GTCGCGGTGC CGACGGTGTT CCACGCCGAG
ACCGGGCTGG CGCTGGCCGA GGCCGGCGTC CACACGCTGA TCGAGAAGCC TTTAGCGCCG
GATGTGGAGT CCGCGACGCA GCTGACCGAG ACCTTCGAGC GGGCCGGACT GGTCGGCGCG
GTCGGCCACA TCGAGCGCTT CAACCCCTCG CTGCAGAACC TGCGCAAGCG GCTGGAGCAC
GGCGAGCTCG GCGAGGTCTT CCAGGTCGTC ACCCGGCGCC AGGGCCCGTT CCCGAACCGG
ATCGCCGACG TCGGCGTGGT GAAGGACCTG GCCACCCACG ACATCGACTC CACGGCCTGG
GTGACCCGCC AGACCTACAC CTCGATCTCG GCGCACACCG CCTACCGCTC GGGCCGCGAG
CACGAGGACC TGATCGCGAT GACCGGCCGG CTGGCCGACG GCACCGTGGT CAACCACCTG
GTGAACTGGC TCTCGCCGAT GAAGGAGCGG GTGACGATCG TCACCGGCGA GAAGGGCTGC
TTCGTCGCCG ACACGCTGAC CGCCGACCTG ACGTTCTACG CGAACGCCTC GGCGCCGACG
ATCCCCACCT GGGAGGCGAT GCAAGCCTTC CGCGGAGTAT CCGAGGGCGA CATGGTGCGC
TTCGCCATCC CGAAGCCCGA ACCCCTGCGC ACCGAGCTCG AGGCGTTCCG CGACGCCGTG
CTGGACGTGG ACGGCGGCCG GGACCGCGTG GTCAGCATGC GCCAGGGCCT CCAGGTCGTC
CGGGTCGCCG AGGCCGCCCT GGACTCCGCC GCGAAGGGCA CGACCGTCGA GCTGTGA
 
Protein sequence
MSGTSGTKLR AGLIGLGMMG RHHARVLGSL DGVELVAVAD PGGDAHGAAN GRPVLGGVEE 
LIAAGIDFAV VAVPTVFHAE TGLALAEAGV HTLIEKPLAP DVESATQLTE TFERAGLVGA
VGHIERFNPS LQNLRKRLEH GELGEVFQVV TRRQGPFPNR IADVGVVKDL ATHDIDSTAW
VTRQTYTSIS AHTAYRSGRE HEDLIAMTGR LADGTVVNHL VNWLSPMKER VTIVTGEKGC
FVADTLTADL TFYANASAPT IPTWEAMQAF RGVSEGDMVR FAIPKPEPLR TELEAFRDAV
LDVDGGRDRV VSMRQGLQVV RVAEAALDSA AKGTTVEL