Gene Caci_7628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7628 
Symbol 
ID8339004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8853597 
End bp8854517 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content62% 
IMG OID644960712 
Productglycosyl transferase family 2 
Protein accessionYP_003118293 
Protein GI256396729 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.325444 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGGGG CTGGATCCTT GGAGAACGAG CAGCCTCCAC CTCATGTCAG TGTGGTTCTG 
CCGTGTTACA ACGAGGAGGC GCACGTTCTG CTGGAGATTC AGCGGATTTG TGCGGCGTTG
GATGCCACGG AGTATCCGTA TGAGGTTTTG GCGATCGATG ACGCCTCCAC CGACGGCACC
TTGGAGGTGC TGCGCAAGGC GGAGATCGAT TTCCCGTCGG TGAAGGTGGT GGCGTTCCAC
CGCAACGGCG GTGCCGGTAC GGTGCGCCGG ATCGGGTCGG GCATGGCCCG GGGCGACATC
GTGGTGTGGA CCGATGCGGA CATGTCGTAT CCGAACGAGC GGATCCCCGA GTTGGTGGAG
ATGCTTGATT TCGACGCCGG TATCGATCAG GTGGTGGGTG CGCGCAAGGC CGAGATGGGT
TCGCACCGTC TGTTGCGGAT CCCGGCGAAG TGGGTGATCC GCAAGATCGC GGAGAAGCTG
ACGAACCAGA AGATCCCGGA TCTGAACTCG GGTCTGCGGG CGATGCGCCG TGAGGTGGCG
CTGCCGTATC TGCGGCTGCT GCCGCCCGGG TTCTCCTGTG TCACCACGAT CACGTTGGCG
TTCATGTCCA ACCAGAAGAC CGTGGTGTAT GTCCCGATCG ACTATGCCAA GCGGGCCGGT
AAGTCCAAGT TCAAGTTTGT GAAGGACGCC TACCGCTACA TCCTGCAGGT CCTGCGGATG
GTGATGTACT TCAACCCGCT GAAGGTCCTG ATGCCCCCGG CCCTGTGGCT GGTCGGCATC
GGCGCGGTCA AGGCCATCTT CGATGTGTCG GTGCATCCGT TCCGGTTCGC GCAGAACACG
GCACTGCTGC TCTTGTCAGG GCTGATCATC GCCTCCATGG CACTCCTCGC GGACCTCATC
GTCCGATCCC GACCGGAGTG A
 
Protein sequence
MKGAGSLENE QPPPHVSVVL PCYNEEAHVL LEIQRICAAL DATEYPYEVL AIDDASTDGT 
LEVLRKAEID FPSVKVVAFH RNGGAGTVRR IGSGMARGDI VVWTDADMSY PNERIPELVE
MLDFDAGIDQ VVGARKAEMG SHRLLRIPAK WVIRKIAEKL TNQKIPDLNS GLRAMRREVA
LPYLRLLPPG FSCVTTITLA FMSNQKTVVY VPIDYAKRAG KSKFKFVKDA YRYILQVLRM
VMYFNPLKVL MPPALWLVGI GAVKAIFDVS VHPFRFAQNT ALLLLSGLII ASMALLADLI
VRSRPE