Gene Caci_7616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7616 
Symbol 
ID8338992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8837771 
End bp8838865 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content73% 
IMG OID644960700 
ProductNucleotidyl transferase 
Protein accessionYP_003118281 
Protein GI256396717 
COG category[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0702464 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGAGG CGATCCTTTT GGTGGGGGGC AAGGGCACAC GCCTGCGCCC GCTGACGGTG 
AACACCCCCA AGCCGATGCT CCCGGTCGCC GGCGTCCCGT TCCTGACCCA CCAGCTGGTC
CGTGCCAAGG ACGCCGGGGT GCACCGCGTG GTGTTCGCCA CCGCCTACAA GGCCGAGGTC
TTCGAGCAGT ACTTCGGCGA CGGCTCCGAC CTGGGCCTGG AGCTGGTCTA CGTGACCGAG
GAGGTGCCGC TGGACACCGC CGGCGCCATC CGCAACGTCG CCGGCAAGCT CACCAGCGCC
CCGGACGAGC CGGTCCTGGT GTTCAACGGC GACATTTTGT CCGGCGTGGA CATCGCCGGT
CTGGTGACCG CCCACCGCGA GCACGGCGCC GACGTCACCC TGCACCTGTC CCGGGTGACC
GACCCGCGCC CCTTCGGCCT GGTCCCCACC GACGCCGAGG GCTGGGTGAC GGCCTTCCTG
GAGAAGCCGC AGCGCCCCGA GGACATCGTC ACCGACCAGA TCAACGCCGG CTGCTACGTC
TTCCAGCGCT CCCGCATCGA CGAGATCCCG GCCGGCCGCC GCGTCTCGGT GGAGCGCGAG
ACCTTCCCGG GCCTGCTCGC CTCCGGCGCC AAGGTCCTCG GCGTGGTCGA GCAGTCCTAC
TGGCTGGACC TGGGCACGCC GGCGGCGTTC GCGAAGGGCT CGGCCGACCT GGTGATGGGC
GTCGTGACCT CCTCGGCCGT CCCGTCCCCG GCCGAGCGCG GCAGCGCCGA GTCCCTGGTC
CTGGCCGGCG CCCGCATCGC CGAGGACGCC GTGGCCGACG CCGGCACCAC CGTCGGCTCC
GGCGCGGTGA TCGAGTCCGG CGCGCACGTC AGCTCCTCGG TCCTGCAGTC CGGCGCGGTC
ATCGGCGCCG GCGCGAAGGT GACCTCCTCG ATCATCGGCG CCGGCGCCCG CATCGGTGCC
CGCACCGTCC TGGACGGCGT GGTGATCGGC GACGGCGCGG TCCTCGGCGC CGACAACGAA
CTGCGCGCCG GTGCTCGCGT CTGGTGCGGG GCGGTGCTGC CGGACAAGGC GGTGCGGTTC
TCCAGCGACG AGTAG
 
Protein sequence
MTEAILLVGG KGTRLRPLTV NTPKPMLPVA GVPFLTHQLV RAKDAGVHRV VFATAYKAEV 
FEQYFGDGSD LGLELVYVTE EVPLDTAGAI RNVAGKLTSA PDEPVLVFNG DILSGVDIAG
LVTAHREHGA DVTLHLSRVT DPRPFGLVPT DAEGWVTAFL EKPQRPEDIV TDQINAGCYV
FQRSRIDEIP AGRRVSVERE TFPGLLASGA KVLGVVEQSY WLDLGTPAAF AKGSADLVMG
VVTSSAVPSP AERGSAESLV LAGARIAEDA VADAGTTVGS GAVIESGAHV SSSVLQSGAV
IGAGAKVTSS IIGAGARIGA RTVLDGVVIG DGAVLGADNE LRAGARVWCG AVLPDKAVRF
SSDE