Gene Caci_7604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7604 
Symbol 
ID8338980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8823752 
End bp8825101 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content71% 
IMG OID644960688 
ProductPhosphomannomutase 
Protein accessionYP_003118269 
Protein GI256396705 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1109] Phosphomannomutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.908268 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCACAGA TCGTCAAGGC ATACGACGTA CGCGGGGTGG TGCCGGACCA GCTCGACGAG 
ACCGACACCG AGGCCCTCGG TGCGGCGTTC GCCGAGTTCG CCGGGGCGCC CACCGTGGTG
GTCGGCCATG ACATGCGGCC CAGCTCGCCG GACCTGGCCG CGGCGTTCGC GCGCGGCGCG
GCGTCCCGGG GCGTGGACGT GGTCCAGATC GGGCTGGCCT CCACCGATCT GCTCTACTTC
GCCTCCGGCG CCCTGGACAT GCCCGGGGCG ATGTTCACGG CCAGCCACAA CCCGGCGAAG
TACAACGGCA TCAAGATGTG CAAGGCCGGC GCCGCGCCGA TCGGCCAGGA GTCCGGTCTC
GTGGAGATCC GGCAGGCCGC GCAGGCGATC CTGGACGGCA CCCCGCTGCC CCCGGCGGAG
AAGACCGGAA CGGTCACCGA GCGCGCGATG CTGGACGACT ACGCCGCGTA CCTCAACAAC
CTGGTGGACC TGTCGAAGAT CCGTCCGCTC AAGGTGGTCG TCGACGCGGC CAACGGTATG
GGCGGCTATA CGGTCCCGAC CGTCTTCAAG GGCCTGCCGC TGGAGGTCGT CGACCTCTAC
TTCGAGCTCG ACGGGACCTT CCCGAACCAC GAGGCCAACC CGCTGGACCC GAAGAACCTG
GTCGACCTGC AGCGCGCGGT CGTCGAGCAC GGCGCGGACC TGGGTCTGGC CTTCGACGGC
GACGCCGACC GCTGCTTCGT GGTCGACGAG CGCGGCGAGC CGGTCTCGCC GTCCACGATC
ACCGCCCTGG TGGCGGTCCG CGAACTGGCC AAGCACCCGG GCGCGACGAT CATCCACAAC
CTGATCACCT CGGCCGCGGT CCCGGAGATC GTGCGCGAGC ACGGCGGCGT GCCGGCGCGC
ACGCGGGTCG GGCACTCCTT CATCAAGCAG GAGATGGCGA GCACCGGCGC GGTCTTCGGC
GGCGAGCACT CGGCGCACTA CTACTTCCAG GACTTCTGGA AGGCCGACAC CGGCATGCTG
GCCGCGATGC ACGTGCTGGC CGCGCTCGGC GAACAGGAGC TGCCGCTGTC GGAGCTGGCG
GCGGACTACA CGCGCTACGC CTCCTCCGGC GAGATCAACA GCGAGGTCGC CGACCAGGCC
GGCCGTTCCG AGGCGGTCCG GGAGGAGTTC GGGAGCCGTC CCGGGGTCAC CGTGGACGAG
CTCGACGGCC TGACGGTCAC CGGCGAGGGC TGGTGGTTCA ACGTGCGGCC GTCGAACACC
GAGCCGCTGC TGCGCCTGAA CATCGAGGCC GCCGACGCCG ACGCGGTCGC CGCGCTGCGC
GACGAGGTGC TGGCCGTCAT CCGCGCCTGA
 
Protein sequence
MSQIVKAYDV RGVVPDQLDE TDTEALGAAF AEFAGAPTVV VGHDMRPSSP DLAAAFARGA 
ASRGVDVVQI GLASTDLLYF ASGALDMPGA MFTASHNPAK YNGIKMCKAG AAPIGQESGL
VEIRQAAQAI LDGTPLPPAE KTGTVTERAM LDDYAAYLNN LVDLSKIRPL KVVVDAANGM
GGYTVPTVFK GLPLEVVDLY FELDGTFPNH EANPLDPKNL VDLQRAVVEH GADLGLAFDG
DADRCFVVDE RGEPVSPSTI TALVAVRELA KHPGATIIHN LITSAAVPEI VREHGGVPAR
TRVGHSFIKQ EMASTGAVFG GEHSAHYYFQ DFWKADTGML AAMHVLAALG EQELPLSELA
ADYTRYASSG EINSEVADQA GRSEAVREEF GSRPGVTVDE LDGLTVTGEG WWFNVRPSNT
EPLLRLNIEA ADADAVAALR DEVLAVIRA