Gene Caci_7577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7577 
Symbol 
ID8338949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8784299 
End bp8785762 
Gene Length1464 bp 
Protein Length487 aa 
Translation table11 
GC content70% 
IMG OID644960657 
Productdrug resistance transporter, EmrB/QacA subfamily 
Protein accessionYP_003118242 
Protein GI256396678 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCTGCAT CCTTCCTATC AACCGGCAGG GGCAAGCTCA TTCTGCTGCT GTTGTGCGGT 
GTCGCGTTCC TGGATCTGGT GGACGCCTCG ATCGTGAACG TGGCACTGCC GTCGATCCGC
CAGGATCTGC ACTTCAGCAC GCAGGGCCTG CAGTGGGTGC CGAGCGGCTA TCTGCTCACC
TACGGCGGCT TCATGCTGCT CGGCGGACGT GCCGCCGACC TGTTCGGCCG GCGCCGGATC
CTGGTCGCCG GGACCATGCT GTTCGGTGTG GCCTCGCTGG CCGGCGGTTT CGCCAACAGC
GCAGGTCTGC TGGTCGGCGC GCGGCTGGTG CAGGGTGTCG GCGCCGCCTT GATGATGCCC
GCCGCGCTGT CGTTGCTCAC CACCACCTTC AAGGAGGGGG CGGACCGAAC CAAGGCGCTC
GGTGCGTGGG GTGCGGTGGC CGGGCTCGCC TCGGCGGTCG GCGTGCTGGC CGGAGGGCTG
CTCACCGACG GTCCCGGGTG GCGCTCGGTG ATGTTCGTGA ACCCGCCGTT CTGCGTGGTG
ATCCTGGTCG CCGCGTTCCG GATGTTCGAG CCCGACGGCA AGAAGGTCGC GCTGAAGGGT
CTGGATCTGG TCGGCGCGTT CCTGGTCACC ACCGGGATGC TCCTGCTGGT GTTCGGTCTG
GTGAAGGCGC CCGACCAGGG CTGGGGTTCG GTGCGGACGG TGGTGGAGCT GGCCGGCGCC
GGGCTGCTGC TGGTCGGGTT CGTCGTCAAC GAGCGCCTCA CCCGCAACCC GCTGCTGCCG
CTGTCGGTCT TCCGGATCCG CGGTCTGGTC GCCGCGGACG TCACGCAGCT GGTCGGAGTC
GCCGGCTTCA TCTCCATGTT CTTCTTCCTC ACCCTGTACA TGCAGAACGT CGAGGGCTGG
TCGCCGATCC GCACGGGTCT GGCCTACCTG CCGATCACGA TCGGTGTCGG GATCGGGGCG
GGAGCGGCGC CGAAGCTGGT CGGCAAGGTC GGTACCCGGC CGGTGGTGGT GACAGGATCG
GCGATCGCCG CGGTCGGCAT CTACCTGCTG GCGCAGCTGA AGGTCCACGG TTCCTACGTC
AGCGGGCTGC TGCCCGGCAT GGTGATCATG GCGATCGGTC TCGGGTTCCT GTTCGTGGCG
ATCACCACGG CCGCCAACGC CGGCGTCCCG CACCACCAGG CGGGCTTGGC CGCGGCGCTG
CTGAACGCCT CGCAGCAGGT CGGCGGCGCG CTCGGACTCG CGATCTTCTC CGCGGTCTCC
ACGGCGCGGG TGACCAGCGA GGTGAAGAAG GGCGTGCAGC CCACCGCGGC GTTCACCTCC
GGACTGTCGT GGGCGCTGAC CGCCTGCGCG ATCGCGGTCG CGTGCGCCGC GGTGATCGCG
CTGCGGACCC GGAACGTGCA CAGCGAGGCG GAGGCCGAGG CGCTGGCCGA CGTGGAGGGG
GACCTGGTGG TCACGACCGG CTGA
 
Protein sequence
MSASFLSTGR GKLILLLLCG VAFLDLVDAS IVNVALPSIR QDLHFSTQGL QWVPSGYLLT 
YGGFMLLGGR AADLFGRRRI LVAGTMLFGV ASLAGGFANS AGLLVGARLV QGVGAALMMP
AALSLLTTTF KEGADRTKAL GAWGAVAGLA SAVGVLAGGL LTDGPGWRSV MFVNPPFCVV
ILVAAFRMFE PDGKKVALKG LDLVGAFLVT TGMLLLVFGL VKAPDQGWGS VRTVVELAGA
GLLLVGFVVN ERLTRNPLLP LSVFRIRGLV AADVTQLVGV AGFISMFFFL TLYMQNVEGW
SPIRTGLAYL PITIGVGIGA GAAPKLVGKV GTRPVVVTGS AIAAVGIYLL AQLKVHGSYV
SGLLPGMVIM AIGLGFLFVA ITTAANAGVP HHQAGLAAAL LNASQQVGGA LGLAIFSAVS
TARVTSEVKK GVQPTAAFTS GLSWALTACA IAVACAAVIA LRTRNVHSEA EAEALADVEG
DLVVTTG