Gene Caci_7576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7576 
Symbol 
ID8338948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8781759 
End bp8784146 
Gene Length2388 bp 
Protein Length795 aa 
Translation table11 
GC content74% 
IMG OID644960656 
Producthypothetical protein 
Protein accessionYP_003118241 
Protein GI256396677 
COG category[R] General function prediction only 
COG ID[COG3973] Superfamily I DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCAAGGG GCACGGAAGA AATCCTCCAC GAACAGCGGT ACCTCGACCT CCTGTACACC 
CGGCTCGACA CGTTGCGCGC CCACGCCGCA GGTCAGCTGT CCGGCGTGCT GCAGGCCTCC
GGGGGGACCC AGCAGGCCCG CACCGAGCGC GACGGCCTGG CCGCCGGCGG CGCCGGCCGG
CTCGCCCAGC TGGACGCGGC CGAGGAAGGG CTCTGCTTCG GCCGCCTGGA CCTCGCCGAG
GGCGAACGCC GCTACGTCGG GCGGATCGGC ATCCTCGACG AGAACGGCGA CTTCGACCCC
TTGCTGCTGG ACTGGCGTGC CCCGGCGGCG CGGCCCTTCT ACGTGGCGAC CTCCGCGGCG
CCGCAGGGCG TGCGGCGGCG GCGCAGCATC CGCACCCGGT TCCGGACCGT CGTGGGGATC
GACGACGACG TGCTCGACCT GGACGTCGCG GCCGACGGAG ACGCCTCCGG GCTGGTCGGC
GAGGGCGCGC TGCTGGCGGC GCTGACCGCC GGGCGCACCG GCCGCATGCG CGACGTCGTG
GAGACCATCC AGGCCGAACA GGACCACGCG ATCCGGTCGG AGCTGCGCGG CGTCCTGGTC
GTGCAGGGTG GTCCCGGGAC CGGCAAGACC GCCGTGGCGC TGCACCGCGC GGCCTACCTG
CTCTACACCT ACCGCGAGCG GCTGGCCAAG CGCGGCGTGC TGATCGTCGG GCCGAACCCG
ACCTTCCTGC GCTACGTCTC GCATGTGCTA CCGGCGCTGG GGGAGACCAG TGCGGTGCTG
TCCACGGTCG GGGAGATGTT CCCGGGAGTG CGGGCCTCGC GCGCCGACGC GCCGGAGGTC
GCCGAGATCA AGGGCCGGGC GGCGATGGCC GAGCTGATCG CCGGTGCGGT GCGGGCCCGG
CAGCGCGTGC CCGAGGACGT GCTGGAAGTG GTCTACGAGG GCGTGAAGTA CCGGCTGGAC
CGGGAGACCT GCGAGGCCGC CCGCGAGCTG GGGCGCAAGG CGAGCCGGCT GCCCAACCTG
GGGCGCAAGG CGTTCGCCGA GCACATCATC GACACCCTGG CCGGGCAGGT CGTGGACCGG
CTCAACGACG ACCCGCACCG CCAGGAGACG CTGGCGATGG TGAACCTGAT CGCCGAGGAG
CTCGGCGAGG ACCCCGCCGA GATGGCCGAC GGCGTGTTCC TGGGCCGGGC CGACCGTGAC
CAGGTCGCGG CGTCGCTGGT CGACGAGCCG AGCGTGCAGG AGGCGCTGGA CTGGCTGTGG
CCGCAGCTGA CCCCGCAGCG GATGCTGGCC GAGCTGTTCG CGACGCCGGA ACTGCTGCGC
GAGGCCGTGG ACGAGGTCGG GGCGGTTGGC GAGGTCGGCG AGGCCAGCGC CGAGGGCGCG
CCGCTGTTGA CGGACGCTGA GATCGACCTG CTGATCCGCA CCCCCGGCGG CTGGTCGGCC
GCCGACATCC CGCTGCTGGA CGAGGCCGCG GAACTGCTCG GCGACTCCGA CACCGCCGAG
GCGGCGGCGC GCGCCGAGGC GGAGCGCCGG GCCCGGATCG CTTACGCGCA GGGCGCGCTG
GAGGTGGCCG AGGGCTCCCG GTCGATCGAC CTGGAGGACC CGCGCGAGGA GATCGTCACC
GCCGTGGACC TGGTCTCGGC CGAGATGCTG GCCGAGCGGT TCGAGGAGGT GGACGGCCGC
AGCGTCGCCG AGCGCGCGAT GGCCGACCGG ACCTGGACCT TCGGGCACGT CATCGTGGAC
GAGGCGCAGG AGCTCTCGCC GATGGCCTGG CGGCTGCTGA TGCGGCGCTG CCCGGCGCGG
TCGATGACCC TGGTCGGCGA CGTGGCGCAG ACCGGCGACC CGGCCGGTGC GGCGTCCTGG
GACACGACGC TCGCGCCGCA CGTCGGGGAC CGGTGGCGGC TGGCGGAGCT GACGGTGAAC
TACCGCACGC CCTCGGAGAT CATGGCCCTG GCCGCGGAGG TGCTCGAGCG CATCGACCCG
GGGCTGAAGC CGCCGCGCTC GGTGCGCTCC AGCGGCGAGG AGCCCTGGCG GGTGTCGGTG
CCGGCGTCTT CGCTCGCTGA GAAGGTCGCG GAGCTGGCGC TGCGCGAGGA CGCGGAGCTG
GCCGCCGGGG ACACCGGACG GATGGCGGTG CTGGTGCCCG CCGAACGCCT CGCCGAGGTG
GCGGCTGCGG TGTCGGCGCG GCTGCCCGAG GCGGGGTACG GCTCGGACCC GGATCTGGAG
CGGCGCACCG TCGTGCTGCC GGTGCGCCAG GCCAAGGGAC TGGAGTTCGA CACGGTGCTG
GTCGTCGACC CGGCGGCGAT CGTCACCGCC CAGCACGGCG AGAACGATCT CTACGTGGCG
CTGACCCGGG CGACACAGCG GTTGGGGATC ATCGACGTCG AAGGCTGA
 
Protein sequence
MSRGTEEILH EQRYLDLLYT RLDTLRAHAA GQLSGVLQAS GGTQQARTER DGLAAGGAGR 
LAQLDAAEEG LCFGRLDLAE GERRYVGRIG ILDENGDFDP LLLDWRAPAA RPFYVATSAA
PQGVRRRRSI RTRFRTVVGI DDDVLDLDVA ADGDASGLVG EGALLAALTA GRTGRMRDVV
ETIQAEQDHA IRSELRGVLV VQGGPGTGKT AVALHRAAYL LYTYRERLAK RGVLIVGPNP
TFLRYVSHVL PALGETSAVL STVGEMFPGV RASRADAPEV AEIKGRAAMA ELIAGAVRAR
QRVPEDVLEV VYEGVKYRLD RETCEAAREL GRKASRLPNL GRKAFAEHII DTLAGQVVDR
LNDDPHRQET LAMVNLIAEE LGEDPAEMAD GVFLGRADRD QVAASLVDEP SVQEALDWLW
PQLTPQRMLA ELFATPELLR EAVDEVGAVG EVGEASAEGA PLLTDAEIDL LIRTPGGWSA
ADIPLLDEAA ELLGDSDTAE AAARAEAERR ARIAYAQGAL EVAEGSRSID LEDPREEIVT
AVDLVSAEML AERFEEVDGR SVAERAMADR TWTFGHVIVD EAQELSPMAW RLLMRRCPAR
SMTLVGDVAQ TGDPAGAASW DTTLAPHVGD RWRLAELTVN YRTPSEIMAL AAEVLERIDP
GLKPPRSVRS SGEEPWRVSV PASSLAEKVA ELALREDAEL AAGDTGRMAV LVPAERLAEV
AAAVSARLPE AGYGSDPDLE RRTVVLPVRQ AKGLEFDTVL VVDPAAIVTA QHGENDLYVA
LTRATQRLGI IDVEG