Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7576 |
Symbol | |
ID | 8338948 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 8781759 |
End bp | 8784146 |
Gene Length | 2388 bp |
Protein Length | 795 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644960656 |
Product | hypothetical protein |
Protein accession | YP_003118241 |
Protein GI | 256396677 |
COG category | [R] General function prediction only |
COG ID | [COG3973] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTCAAGGG GCACGGAAGA AATCCTCCAC GAACAGCGGT ACCTCGACCT CCTGTACACC CGGCTCGACA CGTTGCGCGC CCACGCCGCA GGTCAGCTGT CCGGCGTGCT GCAGGCCTCC GGGGGGACCC AGCAGGCCCG CACCGAGCGC GACGGCCTGG CCGCCGGCGG CGCCGGCCGG CTCGCCCAGC TGGACGCGGC CGAGGAAGGG CTCTGCTTCG GCCGCCTGGA CCTCGCCGAG GGCGAACGCC GCTACGTCGG GCGGATCGGC ATCCTCGACG AGAACGGCGA CTTCGACCCC TTGCTGCTGG ACTGGCGTGC CCCGGCGGCG CGGCCCTTCT ACGTGGCGAC CTCCGCGGCG CCGCAGGGCG TGCGGCGGCG GCGCAGCATC CGCACCCGGT TCCGGACCGT CGTGGGGATC GACGACGACG TGCTCGACCT GGACGTCGCG GCCGACGGAG ACGCCTCCGG GCTGGTCGGC GAGGGCGCGC TGCTGGCGGC GCTGACCGCC GGGCGCACCG GCCGCATGCG CGACGTCGTG GAGACCATCC AGGCCGAACA GGACCACGCG ATCCGGTCGG AGCTGCGCGG CGTCCTGGTC GTGCAGGGTG GTCCCGGGAC CGGCAAGACC GCCGTGGCGC TGCACCGCGC GGCCTACCTG CTCTACACCT ACCGCGAGCG GCTGGCCAAG CGCGGCGTGC TGATCGTCGG GCCGAACCCG ACCTTCCTGC GCTACGTCTC GCATGTGCTA CCGGCGCTGG GGGAGACCAG TGCGGTGCTG TCCACGGTCG GGGAGATGTT CCCGGGAGTG CGGGCCTCGC GCGCCGACGC GCCGGAGGTC GCCGAGATCA AGGGCCGGGC GGCGATGGCC GAGCTGATCG CCGGTGCGGT GCGGGCCCGG CAGCGCGTGC CCGAGGACGT GCTGGAAGTG GTCTACGAGG GCGTGAAGTA CCGGCTGGAC CGGGAGACCT GCGAGGCCGC CCGCGAGCTG GGGCGCAAGG CGAGCCGGCT GCCCAACCTG GGGCGCAAGG CGTTCGCCGA GCACATCATC GACACCCTGG CCGGGCAGGT CGTGGACCGG CTCAACGACG ACCCGCACCG CCAGGAGACG CTGGCGATGG TGAACCTGAT CGCCGAGGAG CTCGGCGAGG ACCCCGCCGA GATGGCCGAC GGCGTGTTCC TGGGCCGGGC CGACCGTGAC CAGGTCGCGG CGTCGCTGGT CGACGAGCCG AGCGTGCAGG AGGCGCTGGA CTGGCTGTGG CCGCAGCTGA CCCCGCAGCG GATGCTGGCC GAGCTGTTCG CGACGCCGGA ACTGCTGCGC GAGGCCGTGG ACGAGGTCGG GGCGGTTGGC GAGGTCGGCG AGGCCAGCGC CGAGGGCGCG CCGCTGTTGA CGGACGCTGA GATCGACCTG CTGATCCGCA CCCCCGGCGG CTGGTCGGCC GCCGACATCC CGCTGCTGGA CGAGGCCGCG GAACTGCTCG GCGACTCCGA CACCGCCGAG GCGGCGGCGC GCGCCGAGGC GGAGCGCCGG GCCCGGATCG CTTACGCGCA GGGCGCGCTG GAGGTGGCCG AGGGCTCCCG GTCGATCGAC CTGGAGGACC CGCGCGAGGA GATCGTCACC GCCGTGGACC TGGTCTCGGC CGAGATGCTG GCCGAGCGGT TCGAGGAGGT GGACGGCCGC AGCGTCGCCG AGCGCGCGAT GGCCGACCGG ACCTGGACCT TCGGGCACGT CATCGTGGAC GAGGCGCAGG AGCTCTCGCC GATGGCCTGG CGGCTGCTGA TGCGGCGCTG CCCGGCGCGG TCGATGACCC TGGTCGGCGA CGTGGCGCAG ACCGGCGACC CGGCCGGTGC GGCGTCCTGG GACACGACGC TCGCGCCGCA CGTCGGGGAC CGGTGGCGGC TGGCGGAGCT GACGGTGAAC TACCGCACGC CCTCGGAGAT CATGGCCCTG GCCGCGGAGG TGCTCGAGCG CATCGACCCG GGGCTGAAGC CGCCGCGCTC GGTGCGCTCC AGCGGCGAGG AGCCCTGGCG GGTGTCGGTG CCGGCGTCTT CGCTCGCTGA GAAGGTCGCG GAGCTGGCGC TGCGCGAGGA CGCGGAGCTG GCCGCCGGGG ACACCGGACG GATGGCGGTG CTGGTGCCCG CCGAACGCCT CGCCGAGGTG GCGGCTGCGG TGTCGGCGCG GCTGCCCGAG GCGGGGTACG GCTCGGACCC GGATCTGGAG CGGCGCACCG TCGTGCTGCC GGTGCGCCAG GCCAAGGGAC TGGAGTTCGA CACGGTGCTG GTCGTCGACC CGGCGGCGAT CGTCACCGCC CAGCACGGCG AGAACGATCT CTACGTGGCG CTGACCCGGG CGACACAGCG GTTGGGGATC ATCGACGTCG AAGGCTGA
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Protein sequence | MSRGTEEILH EQRYLDLLYT RLDTLRAHAA GQLSGVLQAS GGTQQARTER DGLAAGGAGR LAQLDAAEEG LCFGRLDLAE GERRYVGRIG ILDENGDFDP LLLDWRAPAA RPFYVATSAA PQGVRRRRSI RTRFRTVVGI DDDVLDLDVA ADGDASGLVG EGALLAALTA GRTGRMRDVV ETIQAEQDHA IRSELRGVLV VQGGPGTGKT AVALHRAAYL LYTYRERLAK RGVLIVGPNP TFLRYVSHVL PALGETSAVL STVGEMFPGV RASRADAPEV AEIKGRAAMA ELIAGAVRAR QRVPEDVLEV VYEGVKYRLD RETCEAAREL GRKASRLPNL GRKAFAEHII DTLAGQVVDR LNDDPHRQET LAMVNLIAEE LGEDPAEMAD GVFLGRADRD QVAASLVDEP SVQEALDWLW PQLTPQRMLA ELFATPELLR EAVDEVGAVG EVGEASAEGA PLLTDAEIDL LIRTPGGWSA ADIPLLDEAA ELLGDSDTAE AAARAEAERR ARIAYAQGAL EVAEGSRSID LEDPREEIVT AVDLVSAEML AERFEEVDGR SVAERAMADR TWTFGHVIVD EAQELSPMAW RLLMRRCPAR SMTLVGDVAQ TGDPAGAASW DTTLAPHVGD RWRLAELTVN YRTPSEIMAL AAEVLERIDP GLKPPRSVRS SGEEPWRVSV PASSLAEKVA ELALREDAEL AAGDTGRMAV LVPAERLAEV AAAVSARLPE AGYGSDPDLE RRTVVLPVRQ AKGLEFDTVL VVDPAAIVTA QHGENDLYVA LTRATQRLGI IDVEG
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