| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7574 |
|---|
| Symbol | |
|---|
| ID | 8338946 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 8779448 |
|---|
| End bp | 8780605 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 644960654 |
|---|
| Product | Leucine-rich repeat, ribonuclease inhibitor subtype |
|---|
| Protein accession | YP_003118239 |
|---|
| Protein GI | 256396675 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGAGCG GCTTCGAGGC ACGTCCCGCC GAGGAACTGG CGCCGGTCCT GGCCTGGCTG
CGGCGCGGCG AGGCGGTGCG CGCCCGCACC GCGTTCCCGG CCGGCACCGC GCTGCCCGAC
GGCCGCCTGG ACCTGTGCAA GCAGGACCTC GGTCCGCTCG GCGCCGCCGC GGTCGCCGAC
GCGCTGCCCG AGGGCGGCGG CCCGGTGAAG CACCTGCTGC TGGGGACCGA CGGGCTCGGC
GACGGCGGTG CGGCCGCGGT GGCGCCGAAG GCCGTCGCGG CCCGCGTCGA GACCCTCTAC
CTGGGCTGCA ACAACATCGG CGGCGGCGGG GTCTGCGAGA TCGCGAACCA GCTGATCGCC
GCCCCCGGCG TGGTGAAGGC GCTGTGGCTC AAGCGCAACC CGGTCGGCGC GGACGGCGTG
CGCGCGGTCG CCGAGACCGT GCGCGCCGGG ACCGTCCTGC GCACCATCGA CCTGACGCAG
ACCGGGCTGG CCGCGCCGGA CGTCGCGGTG CTGGTCGACG CGATGATCGC GGCCGGCGGC
GGCGCCCGCG CGATCGAACG CCTCTACATC GGCGGCAACC GGCTCGGCGC CGACGGGGCG
CGGGAACTGG CCCGGCTGCT GGCCGCCGGA GCCGTCGCAG AGCTCTACGT CTCGGCCGCG
CGCCTCGGCG ACCCCGGCGC GCAGGTGCTG GCGGCTGCAT TGCGCAGCGC ACCGCCCGGA
GCACTGCGCC GGCTGTCGGT GGCCAGCAAC GGCATCGGCC CGGCGGCACT CGCCGAGCTG
GTCGCGGCCG CCGCCGCGGC GGGGGTCGAG CTGGTCGACG CCGGACGCGT GAAGGCCGCC
GCCATCCTCG CCGCCGACGA CAACCACCTC GACGAGCCCG GCGCCGCGAC CATCGCCGCC
GCCCTGGCCG CCGCTCCGCA CCGCCTCGCC TTCCTCAACC TGCGCTACAC CGACCTCGGC
AGCCCCGGCG CGCTCCGCCT CCTCGAAGGC GCCCAGCGCG CCGCCACGCC GACCCGTTTC
CTGCTCGGCG GCGGTATCGC CAAGCGGGTC AAGAAGGAAC TCACCGCGCT CGCCGCCGAG
ATCCCGGCGT CAGTGTTCGA CGTCGCGCCG GACGTCCGGG CGATCCGCAG CGTCTACCGG
ACCGCGCCGC CCGCCTGA
|
|---|
| Protein sequence | MVSGFEARPA EELAPVLAWL RRGEAVRART AFPAGTALPD GRLDLCKQDL GPLGAAAVAD
ALPEGGGPVK HLLLGTDGLG DGGAAAVAPK AVAARVETLY LGCNNIGGGG VCEIANQLIA
APGVVKALWL KRNPVGADGV RAVAETVRAG TVLRTIDLTQ TGLAAPDVAV LVDAMIAAGG
GARAIERLYI GGNRLGADGA RELARLLAAG AVAELYVSAA RLGDPGAQVL AAALRSAPPG
ALRRLSVASN GIGPAALAEL VAAAAAAGVE LVDAGRVKAA AILAADDNHL DEPGAATIAA
ALAAAPHRLA FLNLRYTDLG SPGALRLLEG AQRAATPTRF LLGGGIAKRV KKELTALAAE
IPASVFDVAP DVRAIRSVYR TAPPA
|
|---|
| |