Gene Caci_7543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7543 
Symbol 
ID8338913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8742430 
End bp8743980 
Gene Length1551 bp 
Protein Length516 aa 
Translation table11 
GC content69% 
IMG OID644960622 
Producthypothetical protein 
Protein accessionYP_003118209 
Protein GI256396645 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.268951 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAGAA CCGTGACGGG GACTCTCACT CAGGCGCCCA ACCGCAGTAC ATCGCACCGG 
GCGACCACCA ACGGAACCAG CTTCAGCGAT CATCTCACCC ACATCCCGCG CGCACCTCGC
GGGACCACAC CGAACATCCT GCGCGCGGCG ACCGCCGCCG CCGGGGTGTT CGCCCTCATC
GCGGCCGTGG CGCTCAGCGG CGCCGCTTCG GGGGCCCGAG CCCAGATCAG CACGGTGCGG
GCCACGGACG CGCCGAGCGT GCGGGCCACC GACGACTTCC TGTTCCGGCT CCAGGACATG
GACGCGCAAC TGGTCAACGC GCTGCTCGTG AACGGCGACA CCGGAATGCG CGTGCCGCGC
GGCGCCAGCG AGGCGCTGTT CGACACCGAC CGCAAGGCCG CCGACGGGGA CCTGGAGGCC
GCGACGGCGG CGCTGTCCGG CGACCAGAGC GCGCTGGAGC AACTGCACAC CGTGGCCGAC
GGCTTCGGCC AGTACCAGGA GCAGTCGGTC CGCACGCTCG CCGACGACGA GCGCGACGGC
GGCACCGCCG CCGGCGGCGC GCCGCCCTCG GTGTTCGCCG ACTACCTGAT CGGGCACGCC
CTGCTGTTCG GCGACAACGA CGACAGCGGG CTGATGAAGT CCGCCACCGA CCTGGAGGCC
GCCAGCAAGA ACGCCATCTC CGCCTCCGCC TCGTCGGCGA ACGACTCGCT GAGCACCGTC
CTCGCCGAGT TCGTGATCTT CGGCGCCCTG CTGGTCGGGG GACTCCTCGC GCTGCAGGCG
ATCCTGTTCC GCCGCTTCCA CCGGATGCTG AACCCGGCCC TGGCCGCGGC GACCGCGGTC
GCCCTGATCC TCATGATCGC CGGCATCGCC GGTACGGCCG GCGCGGCGGA GGACTTCCAC
ACCGCCAAGT CCGACGCCTT CGACTCGGTG CTGGCGCTCA GCGAGGCCAA CGCCACCAGC
GCCGGGATCA ACTCCGACGA GAGCCGCTGG CTGCTGGCGC AGAATTATCC CGAGCAGCTC
AGCGAGTACG AGAACTCGTT CCTTAGGGGC GAGAACAAAA TCGCCGACGT GCCGAACGGG
AGCAGCGTCA CCGACTACGC CGGGTCGCTG GACGGCCAGA AGCTCATCAC AGACGTGAAC
GACGTCGACC AGACGAGCTT GACCCCGAAC AGCAGCTTCG GCAAGGAGTT GGCCAACATC
ACCTTCCCGG GCGAGGCCGA CCAGGCGCTG GCCGCGTTTC GCGCCTACTG CGACTACATC
AAGGACGACG CGAAGCTGCG CGCGATGCCG TCGGACCCGG CCGGAGGACT GAAGGCCGCG
ATCAACTTCG ACACCAACGC CGATGCCCCC GGCTCCTCGG ACCAGGCGTT CACCGCGTAC
AGCAAGGCGC TCGGGGACGT CATCGCCACC AACGAGGCGC ACTTCGAGTC CTCGATGCCG
GCCGCGGAGA ACGGCATCGG GACCTGGACC TGGCTGCCCT ACCTGTTCTC GCTGCTGCTG
ATCGGACTCA CCGTGCTGGG GATGCGGCCT CGGCTTACCG AGTACCGCTG A
 
Protein sequence
MFRTVTGTLT QAPNRSTSHR ATTNGTSFSD HLTHIPRAPR GTTPNILRAA TAAAGVFALI 
AAVALSGAAS GARAQISTVR ATDAPSVRAT DDFLFRLQDM DAQLVNALLV NGDTGMRVPR
GASEALFDTD RKAADGDLEA ATAALSGDQS ALEQLHTVAD GFGQYQEQSV RTLADDERDG
GTAAGGAPPS VFADYLIGHA LLFGDNDDSG LMKSATDLEA ASKNAISASA SSANDSLSTV
LAEFVIFGAL LVGGLLALQA ILFRRFHRML NPALAAATAV ALILMIAGIA GTAGAAEDFH
TAKSDAFDSV LALSEANATS AGINSDESRW LLAQNYPEQL SEYENSFLRG ENKIADVPNG
SSVTDYAGSL DGQKLITDVN DVDQTSLTPN SSFGKELANI TFPGEADQAL AAFRAYCDYI
KDDAKLRAMP SDPAGGLKAA INFDTNADAP GSSDQAFTAY SKALGDVIAT NEAHFESSMP
AAENGIGTWT WLPYLFSLLL IGLTVLGMRP RLTEYR