| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7539 |
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| Symbol | |
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| ID | 8338909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 8736936 |
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| End bp | 8737655 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644960618 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003118205 |
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| Protein GI | 256396641 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.41753 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGCA CCGTCCTCGT CACCGGCGGC AGCAGCGGCA TCGGCCGCGC CGTCGCCGCC
CGCTTCGTCG CCGACGGCGC CGACGTCGTC GTCACCGGCC GCCGCGCGCA GCTCGTCGAG
ACCACCGCTC AGGAGATCGG CGCCGCCGGC GTGGTCTGCG ACGCCACCGA CCCGCAGGCC
GTCGAAGCCC TCGCAGCCCG CTTCGACACC CTCGACGTCC TGGTCAACGC CGCCGGCGGT
CTCGGCAGCG CGCAACCGCG ACCCGGTGCC GGCGCACTGG AGACCGTGCT CGCCGAATGG
CAGGCCGACC TGGACGGGAA CCTGCTCAGC GCGGTCCTCA CCACCACCGC CCTCAAGCCG
GTCCTCGCAC CCGGCGGCAC CGCCATCGCC ATCGGCACGA TCGGCTCCGA ACGCCGAGGC
GGCTCCTACG GCGCCGCCAA AGCCGCCCTC ACCGCCTGGT ACGCGATGCT CTCCGCCGAC
CTCGGCCCGC GCGGCGTCAC CGCCAACGTG GTCTCGCCCG GCTACATCGC CGACACCGGG
TTCTTCCGAG GCGCCATGAC CGACGCCCGC GAGCAGACCC TCATCGCCGA GACCCACACC
AAGCGCGCCG GCGCGCCCCA CGACATCGCC GAGACGGTCT TCTTCCTCGC CTCCCCCGGC
GCCCGGCAGA TCACCGGCCA GACGATCCAC GTCAACGGCG GCGCCTTCAC CACGCGCTGA
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| Protein sequence | MTRTVLVTGG SSGIGRAVAA RFVADGADVV VTGRRAQLVE TTAQEIGAAG VVCDATDPQA
VEALAARFDT LDVLVNAAGG LGSAQPRPGA GALETVLAEW QADLDGNLLS AVLTTTALKP
VLAPGGTAIA IGTIGSERRG GSYGAAKAAL TAWYAMLSAD LGPRGVTANV VSPGYIADTG
FFRGAMTDAR EQTLIAETHT KRAGAPHDIA ETVFFLASPG ARQITGQTIH VNGGAFTTR
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