Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7529 |
Symbol | |
ID | 8338899 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 8722972 |
End bp | 8724345 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644960608 |
Product | transcriptional regulator, XRE family |
Protein accession | YP_003118195 |
Protein GI | 256396631 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.381731 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGGGATT CGTCACGCTT TGGCACCGAG CTGCGGGCCC GCCGCGTAGC AGCCGGGTTG TCGTTGGGCA CCATGGCTGC CTACCTGCGC TACAGCAAGG GCTATCTCAG CAAGATCGAG ACGGGCCGCA TGCCGGCACG CCCAGACTTT GCACGGCGGT GCGACGCATA CCTAAAGGCA GATGGAGCGC TCGCAGCGTT AGTGCCCGAC CAGACGCCGG CTCCGAGGAG CTCTGCTACA GAGACCGACG TCCCTACCAG GTCCGGAAGC CCGGCCAAAC CCGACCTCCA CCAACCTTGG AGCTCGGGCT TCGACGGCGA CGCCTACTCG TTCGCCGCCG TGCCCCGCCG AGACGTCCTC GCGGCCGGCA CTGGCGCCGT GCTCGCTGTC GGTCTCGGCA CCGGCCTCGC CCCGCGCTCG GCGGCGTCCT ATGACGAGCA CGCCACGCGC GCTTTCGAGA CCCTCTTCGG CCAGATGCGG ACGCTCGGCC AAACTGCGAG TCCCGCCGTC GTGCTGCCGA CACTGGTGGC ACAGACTGAG ACATTGCGCG GCCTCGCCGC CCGTGCGTCC GCAGCCACGA GGAACCGCTT GCTCCGCCTG ACGTCCCGCT ACGCGGAGTT CACCGGCTGG ATGGCTCAAG AAGCGGGAAG CGACTCAGGC GCGCTGTGGT GGACAGAGCT CGCTGCTCGC CTCGCCGACG CCGCCGGCGA CACCACGCTC GTCGCCTACT CCGGCATCCG GCGTGCTCTC GTGGCGATGT ACCGGGGTGA CGGTGCGGGG ACCGTGGCGG CGGCTCGCGA CGCCGAGCAC TCGCGCTGGT CACCCACGAT CCGTGAGCAG GCTGCACGTC GCGCCGCGCA GGGCCACGCA CTCCAAGGCG ACTACACCGC GTGCCTCCGT GCTCTCGACC GTGCCCGTGA GTTGGGCTCC CTGGTCCCGG TGCCATCGCG ATCTTCCACG TCACGCCCGA CAGCCGGTTC GCTTTCGCCG ACCGCGGCCA CGGCCACAAC CCGCGCGTTC ACCATCGGCT CGACGACCAT GATCGACCCG CTGGCGATTA CCACCGGCTG GTGCCTGTTC GACCTCGGCC GGTGGGAGCA GTCCGCGGAT TTTCTGGACC CTGCCGTTTC TGCCTTGCAG CCGGACGCCG TCCGTAACCG TGCTCGCTAC GGAACGCGTC TCGCCCTCGC GCACGCGGCC CTAGGCGACC TTCCACGCGC AACGGCGCTG ACGGCCAGCC TCCTCGACGC GGCTGACGCC GCCGACTCGG CGACCATCCG TACCGACCTC CGTCGGCTGT CCCGCACCCT CAACCGCCAC AGCACCGACC CCGCGGTCCG CGCCCTCAGC CCGCGCCTGA CCGCCTCGCT CTAG
|
Protein sequence | MGDSSRFGTE LRARRVAAGL SLGTMAAYLR YSKGYLSKIE TGRMPARPDF ARRCDAYLKA DGALAALVPD QTPAPRSSAT ETDVPTRSGS PAKPDLHQPW SSGFDGDAYS FAAVPRRDVL AAGTGAVLAV GLGTGLAPRS AASYDEHATR AFETLFGQMR TLGQTASPAV VLPTLVAQTE TLRGLAARAS AATRNRLLRL TSRYAEFTGW MAQEAGSDSG ALWWTELAAR LADAAGDTTL VAYSGIRRAL VAMYRGDGAG TVAAARDAEH SRWSPTIREQ AARRAAQGHA LQGDYTACLR ALDRARELGS LVPVPSRSST SRPTAGSLSP TAATATTRAF TIGSTTMIDP LAITTGWCLF DLGRWEQSAD FLDPAVSALQ PDAVRNRARY GTRLALAHAA LGDLPRATAL TASLLDAADA ADSATIRTDL RRLSRTLNRH STDPAVRALS PRLTASL
|
| |