Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7511 |
Symbol | |
ID | 8338881 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 8703039 |
End bp | 8703890 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644960590 |
Product | transcriptional regulator, XRE family |
Protein accession | YP_003118177 |
Protein GI | 256396613 |
COG category | [K] Transcription |
COG ID | [COG1396] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAAGACG GGGAGGGCCA CGCCGGCGGT TTCGCGGAGG CGATCCGCGC CTGGCGCGAG CGCCGGGGTT GGACGCAGGA AGAGCTCTCG CATGCCAGTG GTCTGAGCAC GCGCGCGATC CGCAGCCTGG AACGCGGCCG GACCTTGAAG CCGCGCAGGA CCACCGTGCA GATGCTGGCC GACGCGCTCC AGGTACCGCG GGCACGGTTG ATGGGGACCG TACGGCGCGC GGTCGGCGAC GCCGACGCCG AGGCGGACGG CACGCTCGGC AACGTAGCCA CCGGAAGCGT GGAGGGCGAC GCGGTCGCCA CGGTCAGCGC CGAAGCCCGC TCCATCCACG CCGGCGCCTG GGTCCCGCGC GAGCTGCCGC CGGATCTGGG CCACCGCACC CTGGACGTCC GCGAAGTCGT GGCCGAACTG GTCGCGGGAC CGACGGAGCC CTATCGCGCG GCGATGGTGC GCGTCGACGG CTCCGATGTG GCGATCCGCG CGGCACACCA CGCTTCGGCG AAGTTCTCCG ACGGACAGCT CTACGCGCGC CTCGACGGCA CCCCGCCGGT CGCCCCGGCT GCCGTGCTTC GCAGGTTCCT GCGATCGTTG GACGCCCCGC AGCGGCCGAG CGATGCGACC GTCGACGAAC TCGCGGCGGC CTTCCGCAGC GCGCTGGCCG GACGCCGCAT GCTGGTCGTG CTGGACGGCG CGCGCTCCGA GGCGCAGATC CTGCCGCTGA TCCCGGCCGA GGCGCGGTGC GCGCTCCTGG TCGCGTTCGT GACAGAAGGA CGGCCGGTCG CCCGGCCGCC CTCCCCCGTG CCGTCGTACC GGGCTACTCC TGGGGTGGCA CGGCCAACGT GA
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Protein sequence | MEDGEGHAGG FAEAIRAWRE RRGWTQEELS HASGLSTRAI RSLERGRTLK PRRTTVQMLA DALQVPRARL MGTVRRAVGD ADAEADGTLG NVATGSVEGD AVATVSAEAR SIHAGAWVPR ELPPDLGHRT LDVREVVAEL VAGPTEPYRA AMVRVDGSDV AIRAAHHASA KFSDGQLYAR LDGTPPVAPA AVLRRFLRSL DAPQRPSDAT VDELAAAFRS ALAGRRMLVV LDGARSEAQI LPLIPAEARC ALLVAFVTEG RPVARPPSPV PSYRATPGVA RPT
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