| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7496 |
|---|
| Symbol | |
|---|
| ID | 8338866 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 8688472 |
|---|
| End bp | 8690547 |
|---|
| Gene Length | 2076 bp |
|---|
| Protein Length | 691 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644960575 |
|---|
| Product | glycoside hydrolase family 8 |
|---|
| Protein accession | YP_003118162 |
|---|
| Protein GI | 256396598 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3405] Endoglucanase Y |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGCGCC GCTCCCAGCG CGTTCTCAGT CTGGCGACCG GAATCAGTAC CCTGGCAGGA
TGCGTGGCAC TCGCTGTCGC GCACACCTCC GCGGTGCAAG CCGCCGGCCC GAACTACGCC
TTCCCCCAGC ACCAGACCTA CAAGGTCGGC GTCATGCCGT CGGCCTCCCA GGCCACGCGC
GACGCCGCCG TGGAGAAGCA GTACGACTCG TGGAAGGCCT CGTACCTCGT CCACGGCTGT
GCCAGCAACG AGTACTACGT GTCCACCAAG GGCGACGGTG ACGCCACCAA CAACGGCCCG
GTCTCCGAGG GCCAGGGCTA CGGCATGAAC ATCGTGCCGC TGATGGCCGG GTACGACGCC
AACGCGCAGG CCGAGTTCAA CGGTCTGTGG CAGCTGGTCA AGGACCACGA AGACCAGTAC
GGCATGATGC AGTGGCAGCT GGACGGCAAG ACCTGCAAGT ACTACAGCGG GGGCACGCCG
GACGGCGCCA CCGACGGCGA CCTGGACATC GGCTACGGCC TGATCCTCGC CGACAAGCAG
TGGGGCGGCT ACAGCAGCGA CGCCAAGACG TGGCTGAGCA ACTTCTACGC CCACAACGTG
GCGCCCGACG GCCACCTCAA GTGCGAGGAC GACGGCCCGA ACACCGACAC CCGGCCCTCG
GACCACATGA TCGACCACCT CCGGGCGTTC GCGGCGTACG ACCCCTCGCA CGACTGGAAC
AAGGTCATCA CTCGGACCGA GGCGGTCGAC AGCTCGCTGG TGACCAACTA CTCCGCCGCC
AACGGCCTGC TGCCCGACTT CGTCGTCGGC GCCAACGGCA CGCCGAAGCC GGCTCCGGCG
AACTACCAGG AGAACCAGCC GGACAACATC GTCGGCTACA ACTCGATCCG CGTGCCCTGG
CACATGGGGA CGGACGCGCT GCTCAACGGC GCCACCACCG CGGCGTTCGA GCTGAGCGAC
GCGCAGAAGT GGTCGGCGTG CGCCAAGAAG GTCTCCGGCG GCAAGCCGGG CAACGTCTAC
CCGCACCTGA ACCTGAACTG CACCGGGCAG AACACCTCGG ACGTCGCCGA GGAAGCCGGG
GACTCCATCG GCCCGTCCGC GATGGCCGCG GGCGACCAGG CGTGGACCGA CACGATCTGG
AGCTTCCTGC AGACCAACCC CTACGGTGAC GGCTACTACG GCGAGTCCAT CAAGACGCTG
GTCATGATTG TGATGGCCGG CGACTACTGG AGCCCGGCTT CGGCCTCGAC CCCGCCGCCG
CCCGCCAACG ACTTCTCGAT CTCGGCGTCC CCGGCGTCCG GTTCGGTGAG TCAGGGTTCT
TCGGCGACGG TGTCGGTCGG CACGGCTGTC ACGGCCGGAT CGGCGGAGTC CGTGGCGCTG
TCGGCGTCCG GTCTGCCGAC CGGCGCGACG GCCGGCTTCA GCCCGGCTTC GGTGAACTCC
GGAGCCTCCT CGACGCTGAC CGTCGCGACA TCGTCGTCGA CCCCGGCGGG GACGTACGCG
ATCACAGTGA CCGGGACGGC GTCCTCGGGC TCGCACTCGG CCACGTACTC GCTGACGGTC
ACCACCGTCG GCGGCGGAGG CGGCTGCACT CCGGCGCAAC TGCTGGTGAA CCCCGGCTTC
GAGTCCGGCG CGGCGACCTG GACCCAGACC TCCACCCTCG GGTTCACGCC GATCACCAAG
GCGACCTCGG CCGAGCCGGC GCACGCCGGT TCGTACGTCG CGTGGTTCAA CGGCAACGGC
AGCAAGGACA CCGACACGAT CGCGCAGAGC GTGACGATCC CGTCCGGCTG CTCGGCGTCG
CTGACCTACT GGCTGCACAT CGACACTACG GAGAAGACGA CGACGGCGAA GCCGGACACG
TTCACCGTGC AGGTGCTGAA CTCCTCGGGC ACCGTGCTGG CGACCGTGGG TTCGTTCTCC
AACCTGAACG CGGCTTCGGG CTACTCGCAG AAGACGGCCG ACCTGTCGGC CTACGCGGGC
CAGACCGTCA CGCTGAAGTT CACCGGCAGC GAGACCGACA CCAGTGGCGG GACGACCAAC
TCAGTGATCG ACGACACCTC GCTGACGACG TCCTGA
|
|---|
| Protein sequence | MKRRSQRVLS LATGISTLAG CVALAVAHTS AVQAAGPNYA FPQHQTYKVG VMPSASQATR
DAAVEKQYDS WKASYLVHGC ASNEYYVSTK GDGDATNNGP VSEGQGYGMN IVPLMAGYDA
NAQAEFNGLW QLVKDHEDQY GMMQWQLDGK TCKYYSGGTP DGATDGDLDI GYGLILADKQ
WGGYSSDAKT WLSNFYAHNV APDGHLKCED DGPNTDTRPS DHMIDHLRAF AAYDPSHDWN
KVITRTEAVD SSLVTNYSAA NGLLPDFVVG ANGTPKPAPA NYQENQPDNI VGYNSIRVPW
HMGTDALLNG ATTAAFELSD AQKWSACAKK VSGGKPGNVY PHLNLNCTGQ NTSDVAEEAG
DSIGPSAMAA GDQAWTDTIW SFLQTNPYGD GYYGESIKTL VMIVMAGDYW SPASASTPPP
PANDFSISAS PASGSVSQGS SATVSVGTAV TAGSAESVAL SASGLPTGAT AGFSPASVNS
GASSTLTVAT SSSTPAGTYA ITVTGTASSG SHSATYSLTV TTVGGGGGCT PAQLLVNPGF
ESGAATWTQT STLGFTPITK ATSAEPAHAG SYVAWFNGNG SKDTDTIAQS VTIPSGCSAS
LTYWLHIDTT EKTTTAKPDT FTVQVLNSSG TVLATVGSFS NLNAASGYSQ KTADLSAYAG
QTVTLKFTGS ETDTSGGTTN SVIDDTSLTT S
|
|---|
| |