Gene Caci_7494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7494 
Symbol 
ID8338864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8686796 
End bp8687362 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content71% 
IMG OID644960573 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003118160 
Protein GI256396596 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCGCT GGCCGTCGAA CCCCCGAGGA CGTCTCGAAC AAGCCGCCAT GGACCTGTTC 
GTCGAGCGCG GCTACGACCA GACGACGGTC GCGGAGATCG CCGAGCGCGC CGGCCTGACC
GAGCGCACCT TCTTCCGGCA CTTCAGCGAC AAGCGCGAGG TGCTGTTCCA GGGCGGCGAA
CTCCTCCAAG AGGCGATGGT CCAGACCCTG GCGGGAACCC CGCCCGAGGT CGGACCGTTC
GACGCGGTCC GCGCCGCCAT CACCTGCGTC GCGACCTTCT TCGACGAGCG CCACGACCGC
TCCCAGCTGC GCCAGGGCAT CATCGACGCG CACCCGGAGC TGCAGGAGCG CGAGGTCGCG
AAGATGGCGA AGATCGCCGG GGCGCTCGCC GAGGGTCTGC GCGCTCGCGG GGTCGGCGAG
CCGGACGCCC GTTTGGCGGC GGACGCCGGG ATCGCGGTGT TCCGGGCGTC GTTCGCGCAG
TGGGTGCGGA GCGAGGCGGG GGAGATGGGC AAGACGATGG GGGAGTGCTT CGCCGCGCTG
GAGAATCTGG TCGAATCCGG GCACTGA
 
Protein sequence
MSRWPSNPRG RLEQAAMDLF VERGYDQTTV AEIAERAGLT ERTFFRHFSD KREVLFQGGE 
LLQEAMVQTL AGTPPEVGPF DAVRAAITCV ATFFDERHDR SQLRQGIIDA HPELQEREVA
KMAKIAGALA EGLRARGVGE PDARLAADAG IAVFRASFAQ WVRSEAGEMG KTMGECFAAL
ENLVESGH