Gene Caci_7491 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7491 
Symbol 
ID8338861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8683648 
End bp8684901 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content68% 
IMG OID644960570 
ProductAlginate lyase 2 
Protein accessionYP_003118157 
Protein GI256396593 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACGC CCACGCCCAC CGCTTCACCC CGCATGCTCC GCAAACCACG CCGCCGATCC 
GCCAGGTCCT TCGCCGCCGC GTTCGGCAGC GTCGCGCTGA CCGTCGCCGG CACGAGCCTG
ATGCTGGCTC CGGTCGCCTC CGCCGGAAAC GCTACCGGCC AGGTCACCGG CTACCAAGGG
CTGTGTCTGG ACGACCGCGG CGGCTTGACC GCCAACCTCA ATCCCGTCCA GGTCTACAGC
TGCAACGGCA CCACCGCGCA GCAGTGGACT GTCAACAGCA CCGGCAACAC CTTGCAGGTG
CTCGGCAAGT GTCTCGACGT GCACTCCGCC GGCACCGCCA ACGGCACGAC CGTCGACCTC
TACGACTGCA ACGGATCCGG CGCTCAGGTC TGGGTCCCGC AGTCCAACGG CGAGCTGCTG
AACCCCAACT CCGGCAAGTG CCTGGACGAC ACCGGCCATG GCGGCTCCGG GACCCAGGCG
CAGATCTGGA GTTGCACCGG CTCTACCAAC CAGCAGTGGA CGCTGCCCAC CGGTAGCGGT
GGCGGTACCG GTCCCGGCGG ACTGAACCCC GGCGTCGCGC CCGGAGGCAA CTTCGACCTC
TCGCTGTGGG AGCTCCAACT GCCCACCGGC TCGGCGGGCT CGCCCACCAC GATCCTGCCC
GCGCAGCTCG AAGGCGCCAA CGGCTATCAG AGCCAGTACT TCTACACCGA CTCCACCGAC
GGCGCGATGA CGTTCTGGGA CCCCGAGAAC GGCGTCACCA CCCCGAACTC GAACTACTCG
CGCTCGGAGT TCCGCGAGAT GACCTCCAGC GGCGCGGCAG CCAACTGGTT CGCGGCCGGC
ACCACCAACA CCCTCAGCGC CACGCTGAAG GTCACGCAGG TCCCCGACCA CGTCTGCGTC
GGCCAGATCC ACCTCGGCTC CGGCGGTTCC ACCAAGCCGC TGCTGGAGCT GTTCTACTAC
GCCAGCGGCG ACATCAAGAT GGCCATCGAG CAGACCCCCG CCGGCGGCAA CGAGGTGCTC
TACGACGTCG GCACCGTCCC GGTGGGCACG CAGTTCAGCT ACGTGATCGG ACTCAGCGGC
AGCACCATCA GCCTGTCGCT CAACGGCGGC GCGGCCCGCA CCTGGACCGC CTCCTCCACC
TTCAACGGCT ACGGCATGTA CTTCAAGGCC GGGGACTACG ACCAAAGCTC CGGCAGCAGC
TCCAGTGTCG GCGCCCGGGT CGGCTTCTAC GCCCTGTCGA TCCACCACAG CTGA
 
Protein sequence
MPTPTPTASP RMLRKPRRRS ARSFAAAFGS VALTVAGTSL MLAPVASAGN ATGQVTGYQG 
LCLDDRGGLT ANLNPVQVYS CNGTTAQQWT VNSTGNTLQV LGKCLDVHSA GTANGTTVDL
YDCNGSGAQV WVPQSNGELL NPNSGKCLDD TGHGGSGTQA QIWSCTGSTN QQWTLPTGSG
GGTGPGGLNP GVAPGGNFDL SLWELQLPTG SAGSPTTILP AQLEGANGYQ SQYFYTDSTD
GAMTFWDPEN GVTTPNSNYS RSEFREMTSS GAAANWFAAG TTNTLSATLK VTQVPDHVCV
GQIHLGSGGS TKPLLELFYY ASGDIKMAIE QTPAGGNEVL YDVGTVPVGT QFSYVIGLSG
STISLSLNGG AARTWTASST FNGYGMYFKA GDYDQSSGSS SSVGARVGFY ALSIHHS