Gene Caci_7481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7481 
Symbol 
ID8338851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8675096 
End bp8676412 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content71% 
IMG OID644960560 
Productiron permease FTR1 
Protein accessionYP_003118147 
Protein GI256396583 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2822] Predicted periplasmic lipoprotein involved in iron transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTCCG CGTTCTGCCC GTTTCGTACA ACTAAGGATG CCCTAAGCTC GGCGGCGAAC 
CCGTTCCGGA CGCTCGCCAC GATGGGGCTC CCCTTGTCCA AGATCTCGCC CGGCCTGGCT
TCGCCGAAGG TCGTCCTGCC GCTGGCCGCC GCTGTCGTGG CGTTCGCGGC GGTCGCCGGC
ACGGCGGCGC ACCACTCGCC CGCCAAGCCG AAGTACGCGG CCGGGCTGCC GTCCGACGCG
CTGACGGTCG ACGTGTACGA CTGCGGCGCG AACTGGACCT CGCCGAAGCC GGGCAAGCAG
AACCTGCTGA TCGCCAACAC CGGGATCGAG ACGACCGAGG TGTACCTGGT CGATCCCGGC
AGCGGCGCGA TCTACGGCGA GCTCGTCGGG CTCGCCCCCG GCACCAGCGA CCAGATGCCG
GTCGTGCTCG GCGCCGGCAC GTACGCCCTG CGCTGCTGGC CCGCCGACGC CGACCCGGTC
ACCGGCCCGC CGGTCCGCGT CACCGGCAGC GCGTCGGGCA CGATGGCCGG AACGGTGACG
CCAGGCGTGC TCCCGGTCAC GCGCGAGGAT CTGACCGCGC CGGTGAAGCA GTACCAGGCG
TACGTCGAAG GCGGCCTGGC CACACTGAAA CCGCTGGTCC AGAAACTCCA GAACGACCTC
GCCGCCGGCA ACCTGGACGC CGCGCGCGCC GACTGGACCC CCGCGCACCA GCAGTACGAA
CGCCTCGGCG GCGCGTACGA CGCCTTCGGC GACCTCGGCG ACGCGATCGA CGGACTCCCC
ACCGACCTCC CCGCCGGCGT CAACGACCCC GCCTTCACCG GCTTCCACCG CATCGAGTAC
GGACTCTGGC ACAACCAGAC CGCCACGCAG CTGACCACCC CCGCCGCCGA CCTCGCGACC
GCAGTCGACA AGCTGGCCAC CGAATTCCCC AGCGCCCAGA TCGACCCCCT GGCACTGGGA
CTGCGCACCC ACGAAATCCT GGAGGACGCA GTCCGCTTCG AACTGTCCGA CCAAAGCAAT
CAAGGCAGCG GCACCACCCT GGCCACAATC GACGCGAACA TCGACGGCAC CCAAAGCCTC
CTCAGCATCC TGCGCCCGAT CCTCACCCCG CGCGACCCCG ACCTCCCCCG CATCGACGCC
GCCCTGACCC ACCTACGCAC CCTCGCCGAA GCACAGCACC ACCCCGACGG CTCCTGGACA
CCGCTCACGC ACCTCACCAC CACCCAGCGC GAGGCACTGA ACTCAGCAGC CGGCGGCGCG
GTGGAGCTGC TGGCGCCGGT CGCGACGATC TGCGAACCCC GGCTGGCCAA ATCGTGA
 
Protein sequence
MNSAFCPFRT TKDALSSAAN PFRTLATMGL PLSKISPGLA SPKVVLPLAA AVVAFAAVAG 
TAAHHSPAKP KYAAGLPSDA LTVDVYDCGA NWTSPKPGKQ NLLIANTGIE TTEVYLVDPG
SGAIYGELVG LAPGTSDQMP VVLGAGTYAL RCWPADADPV TGPPVRVTGS ASGTMAGTVT
PGVLPVTRED LTAPVKQYQA YVEGGLATLK PLVQKLQNDL AAGNLDAARA DWTPAHQQYE
RLGGAYDAFG DLGDAIDGLP TDLPAGVNDP AFTGFHRIEY GLWHNQTATQ LTTPAADLAT
AVDKLATEFP SAQIDPLALG LRTHEILEDA VRFELSDQSN QGSGTTLATI DANIDGTQSL
LSILRPILTP RDPDLPRIDA ALTHLRTLAE AQHHPDGSWT PLTHLTTTQR EALNSAAGGA
VELLAPVATI CEPRLAKS