Gene Caci_7462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7462 
Symbol 
ID8338832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8652652 
End bp8655579 
Gene Length2928 bp 
Protein Length975 aa 
Translation table11 
GC content73% 
IMG OID644960541 
ProductPKD domain containing protein 
Protein accessionYP_003118128 
Protein GI256396564 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACGCA CTCGGACACG CCCGCGATTC GGGCGGGCAC TCGTGCCCAT ACTCGCGACC 
CTCACACTCA CCGCCGCGAC GGTCCTGCCC GCCACGGCCT CCGCGGCCGG TGCGGACCCG
TCGCAGAGCA CAGCGACAGC GCCGGCCGCG ACGTCCACCG CGGCGTCGCT GACCCAGGCC
TTCGCGGCCG GGCGGCACGT CGACGACACC GCGATCGGCG GTATCCGTGA CGGATCGCTG
CACACCGGCG CCGCCGACGG CCGTACCTGG GCCATCGCCG CGTTCGCCAC GGCCGAGACG
GCCAAGCCGC AGGAGGCGGT CGGGCTGCAG GACGCCGACA CCGGCGTCTT CGTCCAGACC
GGGAGCAGCT GGCATCTCGT CAGCACGGGC CTGTACGGCT GCGCCGTCGG TCTGCCCGCC
GCGCTGAAGA CCGCGTGGGG CATCTCCGCC TCGAGCGTGT GCACGGGTTC GGCGCCCGCC
GAGCAGGCTC AGGCGCGCAA GGCGTTGGCG GCCGACACGC AGGCGGCGAC GACGCCGGCG
GACACTACGC CGCTCGGCCA GAAGATCGCC GACATCGCGC TGAGCCAGGT CGGGGTCCAG
ACCGATCCGC CGGTGCCGAA CTTCAGCACC ATCGACTGCG ACCCGTACAG CACCCTGGTC
GCGGGCTTCT CCTCCGACAG CGACGGCTGC GGCTTCGACT CCAGCTTCAA CGTCAGGAAC
CAGAACGAGA CCTGGTGCGC CGACTTCGCG AAGTGGGTCT GGCAGCAGGC GGGCGTCACG
GCGGACATGA ACACGCTGAA CGCCGGCGCG GTCTCCTTCC ACACCTGGGC GGTGCACCAG
GGGCAGAACC CGCAGGCGAA CAGCGGGACG CCCGAGCCGG GCGACGCAGT GCTCTTCTAC
TCGCCGGGCC GGCTCCCCAA CGGCTTCGCC GACCACGTCG GCCTCGTCTC CGCCGTCCAC
CCCGACGGCT CGATCGACAT GGTCAACGGC GACTTCTCCG GCGGCGCGGC GGTGAACGTC
CAGTACGACC AGAACATCAC CGACCTGGCC GCCTTCGCCG CGAGCGTCGA GGGCCCGGGC
GAGCAGTGGG CGCTGGTGAC CCCGCCGACC ACGGCGCAGC AGCCGAACCC GGCCGGCACG
ATGGACGCCG CCACGGTCGC CGTCGACGGC GCCACGGCGC GGTTCCACGC GTCCGGCTCG
GTGCCCGGCG GCACGATCAC CGGCTACTAC TGGACCTTCG GCGACACCCG GATGACCAAC
GAGACCGGCG CCGACGTGAC CCACGTCTTC AGCGAGCCGG GCACGTACAC CGCCACCGTG
ACGATCACCT CCAGCTTCGG CACCACCACC ACGGTGCGCA AGAACATCCA GGTCCTCGCG
GCCTCCGCGG CGATCGCCAC GGCGCCGACC GACCAGATCT GGTACGACCC GCTGCCGGTG
GTGCAGTACA CCTTCGTCCG TTCCCAGGGC GGCCTCGCAG TCGACTACTG GAACGGCGGG
CAGTGGATCC AGTGGAGCGT CCCGGGCACC CCTGACGCCA CCGGCAACAT CACAGCCCTG
ACGTTCCCGG ACGCGGCGAA CCGGTGGGTG AACACCGCGC ACGCCTTCTA CCGCACCGCC
GGCGGCGGGC TCGCCGAGAC CACGCAGACC CCGACCGGTT GGCAGACGCA GGCCCTTCCC
GGCACGGCGA TCGCCGGCGG CGCGGTCAAC GCGACGACGA CGGCCGACGG CAGCGTCGAG
GTCTTCTTCG TCAACGCGCA CCGCCAGCTG TCCGCGGACG TGCAGTCGGC CTCCGGCTGG
ACCACTCACG TCCTCGACCC GGCACCGGTC GCGCAGCCCG GCTCGCTGGT GCTCGCCGAC
ACGACGAGCG GCCCGGTGAT CCTCGGGATC GGCCCGGGCG GCCTGGTCAC CTCGAGCACC
GACATCGGCC CGGCCTGGAT CACGGTTCCC ATGGCGGCGT TCGCGGCCAA GGGCAGCAGC
CTCGCCGCGG CCACGACGGC CTCGGGCACC GCGGAGGTCT TCTACACCAC GCCCTCCGGC
ACGCTCGGTA CCGCGACCCA GGACGGACCG CGCTGGAAGC CGTCCACGCT GCCCGGTTCG
CCGGCAGCGA AGACCGGCAA GTCCGCGACG ACCTACCTGC TGCCCTCGGT GCTGCCGGCG
GTCGTCGGCG ACTTCCCGCA GCCGCCCGGC ACGCTGACCG ACACGAGCGT CAGCGCTCCC
CTGGGCATGG AAGTGTTCTA CCTGACCGCG TCCGGCGCGC CGGGGGTCAC CTACAACGAC
GGCACCGGCT GGCAGACCAA GACCCTGCCG GGATCGGCTG ACGGCATCGT GGGCGCGAGC
GCCTACCAGG TCGACGAGGA GCCCTCGAAC CTGTACCTGA CCACCGGGAG CACCATCACC
GAGGAGACGA CCGGGGCACG CAGCGGCGAT CCGTCCGGCT CCTGGAGCAC GGCGCCGGCG
CTGCCCACCG CCCCGTCGAC CTGGGCGAAC CAGATCGTCC TGTACGCGGC CGACGCCGCG
GACGCGACGA CCGCGCGCGC CGCCGCCGAC GCCGCCGGGC TGCCCGCGCA GCAGGTGACC
ACCTCCTTCG CGACGGCCTG GGCCGACACC CTCGACGGCA ACTACCTCGT CTACGCGGTC
GGCACCCCGG CAGTCCGCGC GCTGTACAGC AACGTGTGCA ACTGGGCGAA CCCGTCCGAC
CTCCCGGGAC CGGGCACCCC GTTCTCCTAC GGCGTCGACC CGGTGAACTC GGTGGCGCAA
CTCGGCGCCG GCAACTTCGT CAACGCCGCC GGCGCCACCG CCACGGACAC CCAGGCGATC
GCGACGGACC TGGCGTACTA CGCGCTGCAC GGCGTGCTGC CGCCCGGCGT GACGTCGGTG
CCGCCGCAGG TCGGTGCGCC CTATGCCTGT ATGGGGAGCC CGAGCTAA
 
Protein sequence
MPRTRTRPRF GRALVPILAT LTLTAATVLP ATASAAGADP SQSTATAPAA TSTAASLTQA 
FAAGRHVDDT AIGGIRDGSL HTGAADGRTW AIAAFATAET AKPQEAVGLQ DADTGVFVQT
GSSWHLVSTG LYGCAVGLPA ALKTAWGISA SSVCTGSAPA EQAQARKALA ADTQAATTPA
DTTPLGQKIA DIALSQVGVQ TDPPVPNFST IDCDPYSTLV AGFSSDSDGC GFDSSFNVRN
QNETWCADFA KWVWQQAGVT ADMNTLNAGA VSFHTWAVHQ GQNPQANSGT PEPGDAVLFY
SPGRLPNGFA DHVGLVSAVH PDGSIDMVNG DFSGGAAVNV QYDQNITDLA AFAASVEGPG
EQWALVTPPT TAQQPNPAGT MDAATVAVDG ATARFHASGS VPGGTITGYY WTFGDTRMTN
ETGADVTHVF SEPGTYTATV TITSSFGTTT TVRKNIQVLA ASAAIATAPT DQIWYDPLPV
VQYTFVRSQG GLAVDYWNGG QWIQWSVPGT PDATGNITAL TFPDAANRWV NTAHAFYRTA
GGGLAETTQT PTGWQTQALP GTAIAGGAVN ATTTADGSVE VFFVNAHRQL SADVQSASGW
TTHVLDPAPV AQPGSLVLAD TTSGPVILGI GPGGLVTSST DIGPAWITVP MAAFAAKGSS
LAAATTASGT AEVFYTTPSG TLGTATQDGP RWKPSTLPGS PAAKTGKSAT TYLLPSVLPA
VVGDFPQPPG TLTDTSVSAP LGMEVFYLTA SGAPGVTYND GTGWQTKTLP GSADGIVGAS
AYQVDEEPSN LYLTTGSTIT EETTGARSGD PSGSWSTAPA LPTAPSTWAN QIVLYAADAA
DATTARAAAD AAGLPAQQVT TSFATAWADT LDGNYLVYAV GTPAVRALYS NVCNWANPSD
LPGPGTPFSY GVDPVNSVAQ LGAGNFVNAA GATATDTQAI ATDLAYYALH GVLPPGVTSV
PPQVGAPYAC MGSPS