Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7458 |
Symbol | |
ID | 8338828 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 8645310 |
End bp | 8646431 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644960537 |
Product | hypothetical protein |
Protein accession | YP_003118124 |
Protein GI | 256396560 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0297614 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.563614 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAAGATCT TCATCAGCAG CGCACGAAAG GGTCTGGAGA AAGAGCGCGA CTCGCTTCCC GGCTTGATCA CTGCGCTGGG TCATACACCA GTACACTTCG AGGACTTCTC AGCCCAGTCC ACGCCCAGTC GAGAGGCATG TCTGGCTGCC CTGGATTCGG CGGATGTTTG CCTGCTCCTG TTGGGCCCGA ACTACGGCCA CATTTTCCCG GAGACTGGAC AGTCTGCCAC CCATGACGAA TGGATTCACG CCCAGGTCAA GGGGATTCCG CGGCTCGTTT TTCGCAAGGC CGGGGTGAAG CTCGAGCCCA AGCAGCACGA GTTCGCCCAA ACCGTGGAGG CATACGCCAC AGGCGTATTC CGGACTACCT TCGAGGACAC CCCAGATCTC CAGATCAAGA TTGCCCAAGC GCTGCGCGAG TTGGGCTCGA AGCCGTCCCC CCTTGAATTC AAGAGGTTGA CTCAGCCGCT GGCAATAAGC TGGACTTCGG CGGAAAATGG AGCGAATTCC CCTCTTAGTG ACCGCGGAGC TCTCCTCGAA ACTCACGTCG CACCCGTGGA TCACTCGGGA TACTCTGCTC GCGAAATGGA GTCGTTGATC AATTCGATGC AGAACCGCGT TCGCGCGACC CACTACATCC AGAACGACGT CGCGCTTAGC CTCTCCCGGT CAAAGGATCA TGCGGTCGTC AGAATTGAGG ACAGTGATCG TCCGGCCTGG GACAAACCCA AGGCCGGAAG GCTTCTCGAA GTTCGGCTAT ACCAGACTGG TCAGATCTCA ATCAGAGCCA CGCTCCCAAG AGACCGGATA GGATCAATTC TGGATCGTAA GGCGCTAACC CAGCAGATCG CTGAAATGCT TCGACTTACG GGAGCCTTGG GCATCATCGA GCAGGGGCAT GTAGCGGTAG CAGTTGGAGT GTTGCCAGAG ATGACCACCA GCGTCGACAC CTTTGATCCA AACCACCCGC GGTCCAGTGC CCAGTTCATG CGCTTCGGCC AGTCGCCTGA CATGGTACGG ATCGAGCCGG ACGAATCGGT CAACCTCACA GCCTTGGGGG TCGGAGCAGG CGAAGTGGCT GGCAATCTCT CTCAAGCACT GTTTACTCAG CTCACGATGT AG
|
Protein sequence | MKIFISSARK GLEKERDSLP GLITALGHTP VHFEDFSAQS TPSREACLAA LDSADVCLLL LGPNYGHIFP ETGQSATHDE WIHAQVKGIP RLVFRKAGVK LEPKQHEFAQ TVEAYATGVF RTTFEDTPDL QIKIAQALRE LGSKPSPLEF KRLTQPLAIS WTSAENGANS PLSDRGALLE THVAPVDHSG YSAREMESLI NSMQNRVRAT HYIQNDVALS LSRSKDHAVV RIEDSDRPAW DKPKAGRLLE VRLYQTGQIS IRATLPRDRI GSILDRKALT QQIAEMLRLT GALGIIEQGH VAVAVGVLPE MTTSVDTFDP NHPRSSAQFM RFGQSPDMVR IEPDESVNLT ALGVGAGEVA GNLSQALFTQ LTM
|
| |