| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7452 |
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| Symbol | |
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| ID | 8338822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 8639157 |
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| End bp | 8640281 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644960531 |
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| Product | spermidine/putrescine ABC transporter ATPase subunit |
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| Protein accession | YP_003118118 |
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| Protein GI | 256396554 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.252559 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCA CCCCTTCCGC GCTCTCCCCC ACCACGCCCG ACCCGTCCGC CACGCCCGCG
GTACGGCTGG ACCGGATCAC CAAGAGGTTC GGCGGCGACA ACGACACTGC CGCCGCCGTC
GCCGATCTGA GCCTGGACAT AGCCCCCGGC GAGTTCTACT CGCTGCTCGG GCCCTCCGGC
TGCGGCAAGA CCACGACCCT GCGGATGATC GGCGGCTTCG CCGATCCGAC GTCCGGCTCG
ATCCTGCTCG CCGGACAGGA CGTGACGCGG TTGCCGCCGA ACAAGCGGAA CGTGAACACC
GTGTTCCAGA GCTACGCGCT GTTCGACCAC CTCTCGGTGG CCGACAACGT GGCCTTCGGC
CTCAAGCGCG CCGGCGTCGC CCGGGAGGAG ATCCGGCGGC GGGTCGGCGA GATGCTGGAG
CTGGTGCAGC TGACGACGTT CGCCGACCGC AAGCCGCGCA CGCTGTCCGG CGGTCAGCGC
CAGCGCGTCG CACTGGCCCG GGCCCTGGTC AACCGGCCGG CGGTCCTGCT GCTGGACGAG
CCGCTGGCGG CGCTGGACCT GAAGCTGCGC CGGCAGATGC AGATCGAGCT CAAGCAGATC
CAGCGCGAGG TCGGCATCAC CTTCGTGTTC GTCACCCACG ACCAGGACGA GGCGCTGACC
ATGTCCGACC GGGTGGCCGT GATGAACGCC GGACGCGTGG AGCACTGCGG GACGCCCGAG
GACGTGTATG AGCATCCTGA GACGAAGTTC GTCGCGTCCT TCATGGGGAC GTCGAACCTC
ATGACCGGCG TCTACCGGTC CGGCGCGGTG CAGATCACCG GCGGTCCGGC GATCGCCGTG
GGACCGTGCC CGGAGATCAC CGAAGGCAGC GAGGTCAGCA TCTCGATCCG GCCGGAGAAG
ATCTGGCTCT CGGACTTCGA GGCGGACATG CCGCGGGCTC GCGGCGTCAT CAAGGACACC
GTCTACTCCG GTCCGACCAC GACCTATCTG ATCGAGCTCG CGCCCGGCGT GACCGTGGCC
GCGCTGGAGC AGAACACCGC GCGGTCGCGG AACGAGGACC GCTGGGAGGG CGGGGAATCG
GTGGAGATCG CCTGGAAGCC GGAACACTGC CTGGTCCTGG CCTGA
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| Protein sequence | MSTTPSALSP TTPDPSATPA VRLDRITKRF GGDNDTAAAV ADLSLDIAPG EFYSLLGPSG
CGKTTTLRMI GGFADPTSGS ILLAGQDVTR LPPNKRNVNT VFQSYALFDH LSVADNVAFG
LKRAGVAREE IRRRVGEMLE LVQLTTFADR KPRTLSGGQR QRVALARALV NRPAVLLLDE
PLAALDLKLR RQMQIELKQI QREVGITFVF VTHDQDEALT MSDRVAVMNA GRVEHCGTPE
DVYEHPETKF VASFMGTSNL MTGVYRSGAV QITGGPAIAV GPCPEITEGS EVSISIRPEK
IWLSDFEADM PRARGVIKDT VYSGPTTTYL IELAPGVTVA ALEQNTARSR NEDRWEGGES
VEIAWKPEHC LVLA
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