| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7449 |
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| Symbol | |
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| ID | 8338819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 8636101 |
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| End bp | 8637276 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644960528 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_003118115 |
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| Protein GI | 256396551 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.266328 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCGCC AGTCTTCCGA GGAGTCCTTC GAGCTGTCCC GCCGATCGCT CCTGCGCGCC
GGGATGGCCG GCACCGTCGG CCTGGCCGCG GCCGGCTGCG GTTTCACCGG GTCGAACCAG
TCCTCGTCCG CCGCCGGAGC GGACGGGACC GCGGGTGCGG CCGCGACGTC CGCCGAGCCG
CCGATCGACG TCAAGGTGGA CGGCGACCTC GTCTACTTCA ACTGGGCCGA TTACGTCGAC
CCGTCGGTCT TCGACGGGTT CCAGAAGGAG TACGGCGTCA AGGTCGTCCA GTCCAACTTC
GACTCGATGG AGTCGATGGG CGCCAAACTG GCCGCCGGGA ACAAGTACGA CGTCGTCTTC
CCGTCGGCCA AATGGACCCA GCGCCTGGCC GTCGCCGGGA AGCTGCGCCG CATCGACCAC
TCGGCGCTGA AGAACGCCCC GGCGATCTTC GACCATTACG ACTACTTCCA GGACCCCTGG
TACGACACGG CTTCCGCGCA CAGCGTCCCC TTCACCATGT ACAAAACCGG GATCGGCTGG
CGCAAGGACA AGCTCGGGGA CCTCACCGGT TCCTGGCAGG ACCTGTGGTC GCCGGCCGCC
AGCGGGAACG TCTTCCTGTT GGACGACCAG GACGAGGCGC TGGGCATGGC GGCGCTCAAG
CTGGGCCTGC CGATCAACAC CGCCGACTCC GGCGATCTGG CGAAGATCGA CGCCGAGCTG
AAGAACCTAC GCTCCCACCT GCGCGGCTTC TCCAGCGACG ACTACAACAA CCTGCTCAAC
GGCAACGCGT TGATGACGCA GGCGTGGAGC GGCGACATGG TCTCGGTGCT CAACCAGGCC
AACGACGCCT CGGTCTACGG ATTCCAGACG GCGAAGGAGG GCTCGCCGGT GAACACCGAC
TGCTACGCGA TCCCGGCGAA CGCCGAGCAT CCCGGGACGG CGATGCTCTT CATCGACTAC
ATGCTCCGGC CGGAGAACGT CCTCAAGAAC ATCGACTACA TCGGGTACCC GATGCCGGTG
AACGGCACCG AGGACGCCTA CGCGAAGCTC GTCGCGCAGT TCCCGCAGTG CGTCGTCAAG
CCCGAGGACC TGGTGAACGA CCACATGTTC CAGAACGGCA CGGCTGCCCA GGGGCACGCC
CGCGACGCCG TGTGGACCGA CGTGAAAGCG GGCTGA
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| Protein sequence | MSRQSSEESF ELSRRSLLRA GMAGTVGLAA AGCGFTGSNQ SSSAAGADGT AGAAATSAEP
PIDVKVDGDL VYFNWADYVD PSVFDGFQKE YGVKVVQSNF DSMESMGAKL AAGNKYDVVF
PSAKWTQRLA VAGKLRRIDH SALKNAPAIF DHYDYFQDPW YDTASAHSVP FTMYKTGIGW
RKDKLGDLTG SWQDLWSPAA SGNVFLLDDQ DEALGMAALK LGLPINTADS GDLAKIDAEL
KNLRSHLRGF SSDDYNNLLN GNALMTQAWS GDMVSVLNQA NDASVYGFQT AKEGSPVNTD
CYAIPANAEH PGTAMLFIDY MLRPENVLKN IDYIGYPMPV NGTEDAYAKL VAQFPQCVVK
PEDLVNDHMF QNGTAAQGHA RDAVWTDVKA G
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