| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7447 |
|---|
| Symbol | |
|---|
| ID | 8338817 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 8634003 |
|---|
| End bp | 8635199 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644960526 |
|---|
| Product | Rieske (2Fe-2S) domain protein |
|---|
| Protein accession | YP_003118113 |
|---|
| Protein GI | 256396549 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.857744 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCGATCA CCGAACCACT GAGTGCGTCA GCTCCCCCGG GCCCGCACCC GCAAGACCCG
CCGCCGGCTC TGGCGGCGCG CTACTACACC GATCCGGCGC TCGCCGAGGC CGAGCTGCGC
GCGGTCTTCG CCAAGACCTG GCAGCTCGTC TGCCACGAGT CCGACCTGCC GAACCCGGGC
TCCCGGCTGG CGGCCTGGGC CGCCGGACGC GAGGTGCTCG TGGTCCGCGA CGCCGAGGGC
GGGCTGGCCG CGTTCCTCAA TGTCTGCCGC CACCGCGGCA CCCGGCTGGT CGACGCCCCC
GAGCCGGAGC CGAAGGCCGC CGAGGCGATC CGCTGCCCGT ACCACGGCTG GACCTACAAG
CTCGACGGCT CGCTCGTCGG CGCGCCGGAG GGCCGGCAGA TCCCGTGCCT GGACAAGCCG
AAGCTCGGGC TGTTCACCGT CGCTGTGGAG TCCTTCTTGG GCTTCGTCTT CGTCAACGTC
GACGGCACCG CGGCACCGCT GGCGCAGACC TGCGCGGGCC TGGCCGAGCA GGTCGGCCGC
TACGCCGGCG CCGAGCTGGT CCCGGTGGGC CGCGACCGGA TCCACGATCT GGACAAGGCC
GAGGTGCAGA GCGCCAACTG GAAGGTCGCG GTCGACAACT ACCTGGAGGG CTACCACGTA
CCGGTGGCGC ACCCCGGGCT GATGCGGCTG CTCGACTACC AGAACTACCG AATCACCGAG
GCGGCCGAGG ATTACGTCCT GTTCCAGACA CCGCTGCGCG ACAAGCCCTC GTCCAACTGG
CGCGAACGGC TCTACCAGCG GCTGACCTCG ACGATGCCGG GACTGCGCGC CGAGGACCAG
CGGATGTGGC GGTACGCCGT CATCTACCCG AACACGCTGC TCGACTTCTA CCCCGACCAC
GTTCTCGCCT GGACCGCCAT CCCCGCGGGC CAGGAACGCG TCGCCGTCCC CGGCGGCTTC
TACACCCGCC GCGGCTCCAG CCGCCGCACC CGCCTGGCGC GCCGGCTCAA CATCGCGATC
GGCTGGATCA CGAGCGATGA GGACGCCGAA CTGCTGCGCC GGGTGCAGCA CGGCATCCGC
ACTCCCGGCT TCGAACCCGG TCCGCTGTCG CGCCGCGAGG CCGGCGTCGG CTGGTTCGCC
GATAGGATCC GAGCCGATAT GCCGGTGCGT GGTGACGGGA GCGATGGACC GCGATGA
|
|---|
| Protein sequence | MPITEPLSAS APPGPHPQDP PPALAARYYT DPALAEAELR AVFAKTWQLV CHESDLPNPG
SRLAAWAAGR EVLVVRDAEG GLAAFLNVCR HRGTRLVDAP EPEPKAAEAI RCPYHGWTYK
LDGSLVGAPE GRQIPCLDKP KLGLFTVAVE SFLGFVFVNV DGTAAPLAQT CAGLAEQVGR
YAGAELVPVG RDRIHDLDKA EVQSANWKVA VDNYLEGYHV PVAHPGLMRL LDYQNYRITE
AAEDYVLFQT PLRDKPSSNW RERLYQRLTS TMPGLRAEDQ RMWRYAVIYP NTLLDFYPDH
VLAWTAIPAG QERVAVPGGF YTRRGSSRRT RLARRLNIAI GWITSDEDAE LLRRVQHGIR
TPGFEPGPLS RREAGVGWFA DRIRADMPVR GDGSDGPR
|
|---|
| |